Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028445.1-P | Field mustard | cytosol | 99.25 | 100.0 |
| CDY65333 | Canola | cytosol | 96.27 | 96.99 |
| AT5G39950.1 | Thale cress | cytosol | 81.34 | 81.95 |
| KRH01124 | Soybean | endoplasmic reticulum | 64.18 | 64.66 |
| PGSC0003DMT400003564 | Potato | plastid | 65.67 | 61.97 |
| VIT_14s0066g02560.t01 | Wine grape | cytosol | 61.19 | 60.29 |
| KRH40137 | Soybean | endoplasmic reticulum | 56.72 | 58.02 |
| KRH40136 | Soybean | endoplasmic reticulum | 67.91 | 57.96 |
| KRH01123 | Soybean | cytosol | 49.25 | 53.66 |
| CDY57101 | Canola | cytosol | 65.67 | 53.33 |
| KRH40138 | Soybean | cytosol, plastid | 49.25 | 52.8 |
| TraesCS5B01G452700.1 | Wheat | cytosol, golgi, unclear | 49.25 | 50.38 |
| TraesCS5D01G454800.1 | Wheat | cytosol | 49.25 | 50.38 |
| TraesCS5A01G448200.1 | Wheat | cytosol | 48.51 | 49.62 |
| HORVU5Hr1G107210.1 | Barley | cytosol | 48.51 | 49.62 |
| GSMUA_Achr2P17710_001 | Banana | cytosol | 44.78 | 47.24 |
| CDY37032 | Canola | cytosol | 65.67 | 47.06 |
| Zm00001d034491_P001 | Maize | plastid | 46.27 | 46.62 |
| Os03t0800700-01 | Rice | plastid | 46.27 | 46.27 |
| Solyc02g087630.2.1 | Tomato | plastid | 58.21 | 46.15 |
| GSMUA_Achr9P10960_001 | Banana | mitochondrion, plastid | 42.54 | 45.97 |
| Os07t0190800-01 | Rice | cytosol | 47.01 | 45.65 |
| EER90722 | Sorghum | cytosol | 44.78 | 45.11 |
| HORVU5Hr1G107170.1 | Barley | cytosol | 48.51 | 44.83 |
| CDY53958 | Canola | cytosol | 38.06 | 43.59 |
| KRH01119 | Soybean | cytosol | 45.52 | 43.57 |
| CDY36029 | Canola | cytosol | 38.06 | 43.22 |
| CDY32970 | Canola | cytosol | 39.55 | 43.09 |
| CDY39355 | Canola | cytosol | 38.06 | 42.86 |
| CDY29406 | Canola | cytosol | 38.06 | 42.86 |
| CDY43592 | Canola | cytosol | 38.81 | 42.28 |
| CDX77974 | Canola | cytosol | 35.82 | 42.11 |
| CDY28996 | Canola | cytosol | 35.82 | 42.11 |
| CDX90669 | Canola | cytosol | 35.82 | 42.11 |
| GSMUA_Achr7P16980_001 | Banana | cytosol | 32.09 | 41.75 |
| CDY45144 | Canola | cytosol | 38.81 | 40.62 |
| CDY30901 | Canola | cytosol | 38.81 | 40.62 |
| CDY27290 | Canola | cytosol | 38.06 | 39.84 |
| CDY34470 | Canola | cytosol | 15.67 | 36.21 |
| CDY23544 | Canola | cytosol | 38.06 | 34.46 |
| CDY23543 | Canola | cytosol | 35.82 | 34.29 |
| CDY48387 | Canola | cytosol | 35.82 | 34.04 |
| GSMUA_Achr7P12220_001 | Banana | cytosol | 29.1 | 33.62 |
| CDY11645 | Canola | cytosol, plastid | 37.31 | 33.11 |
| CDY38768 | Canola | cytosol, plastid | 37.31 | 33.11 |
| CDY48388 | Canola | cytosol | 35.82 | 32.65 |
| CDY03743 | Canola | extracellular | 20.15 | 31.4 |
| HORVU6Hr1G018190.1 | Barley | mitochondrion | 21.64 | 31.18 |
| CDY70695 | Canola | cytosol | 32.09 | 31.16 |
| CDX73940 | Canola | cytosol | 32.09 | 30.71 |
| CDY27215 | Canola | mitochondrion | 32.84 | 29.53 |
| CDX72138 | Canola | mitochondrion | 32.84 | 29.53 |
| CDY34646 | Canola | cytosol | 27.61 | 29.37 |
| CDY58647 | Canola | cytosol | 30.6 | 29.29 |
| CDY35999 | Canola | cytosol | 30.6 | 29.29 |
| CDY67121 | Canola | mitochondrion | 32.84 | 28.95 |
| CDY22165 | Canola | cytosol | 31.34 | 28.77 |
| CDY04457 | Canola | cytosol | 20.9 | 28.57 |
| CDX67647 | Canola | mitochondrion | 32.09 | 28.48 |
| CDY32015 | Canola | mitochondrion | 32.09 | 28.48 |
| CDY38116 | Canola | plastid | 30.6 | 21.93 |
| CDX73752 | Canola | cytosol, mitochondrion | 35.82 | 21.82 |
| CDY69984 | Canola | plastid | 29.85 | 21.51 |
| CDY51539 | Canola | plastid | 26.12 | 19.44 |
| CDY28704 | Canola | plastid | 26.12 | 19.44 |
| CDY27984 | Canola | nucleus | 30.6 | 19.43 |
| CDY53739 | Canola | plastid | 26.12 | 19.34 |
| CDY00656 | Canola | cytosol | 31.34 | 11.26 |
| CDY11641 | Canola | plastid | 17.16 | 11.11 |
Protein Annotations
| MapMan:10.6.1 | Gene3D:3.40.30.10 | GO:A0A078BT94 | EnsemblPlants:CDX67442 | ProteinID:CDX67442 | ProteinID:CDX67442.1 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0006662 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00098544001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF243 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EDB330 | SEG:seg | : | : |
Description
BnaA07g14820D
Coordinates
chrLK031787:-:279794..281273
Molecular Weight (calculated)
14693.7 Da
IEP (calculated)
5.806
GRAVY (calculated)
-0.131
Length
134 amino acids
Sequence
(BLAST)
(BLAST)
001: MGGVLSSVLG GGGGDEAVAG NESEQSRVMK FSSSARWQLH FNEIKESSKL LVVDFSASWC GPCRMIEPAF IAMSAKFTDV EFVKLDVDEL PDVAKEFNVT
101: GMPTFVLVKN GKEIERIVGA RKDELEKKVL KHRA
101: GMPTFVLVKN GKEIERIVGA RKDELEKKVL KHRA
001: MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
101: MPTFVLVKRG KEIERIIGAK KDELEKKVSK LRA
Arabidopsis Description
TRX2Thioredoxin H2 [Source:UniProtKB/Swiss-Prot;Acc:Q38879]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.