Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29406 | Canola | cytosol | 97.48 | 97.48 |
| AT1G19730.1 | Thale cress | cytosol | 87.39 | 87.39 |
| CDY53958 | Canola | cytosol | 64.71 | 65.81 |
| CDY36029 | Canola | cytosol | 63.03 | 63.56 |
| CDY28996 | Canola | cytosol | 57.98 | 60.53 |
| CDX90669 | Canola | cytosol | 57.98 | 60.53 |
| CDX77974 | Canola | cytosol | 57.98 | 60.53 |
| CDY43592 | Canola | cytosol | 61.34 | 59.35 |
| CDY32970 | Canola | cytosol | 60.5 | 58.54 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 57.14 | 55.74 |
| CDY34470 | Canola | cytosol | 26.89 | 55.17 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 54.62 | 54.62 |
| TraesCS1B01G339000.1 | Wheat | cytosol | 52.94 | 53.39 |
| TraesCS1B01G338800.1 | Wheat | cytosol, golgi, plastid, unclear | 55.46 | 51.97 |
| TraesCS1A01G325600.1 | Wheat | cytosol | 56.3 | 51.54 |
| OQU78269 | Sorghum | cytosol | 52.94 | 50.0 |
| Zm00001d038652_P003 | Maize | cytosol | 51.26 | 47.66 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 40.34 | 45.28 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 42.02 | 44.25 |
| CDY65333 | Canola | cytosol | 43.7 | 39.1 |
| CDX67442 | Canola | cytosol | 42.86 | 38.06 |
| CDY27290 | Canola | cytosol | 37.82 | 35.16 |
| CDY30901 | Canola | cytosol | 36.97 | 34.38 |
| CDY45144 | Canola | cytosol | 36.97 | 34.38 |
| CDY34646 | Canola | cytosol | 35.29 | 33.33 |
| CDY70695 | Canola | cytosol | 36.13 | 31.16 |
| CDX73752 | Canola | cytosol, mitochondrion | 57.14 | 30.91 |
| CDY57101 | Canola | cytosol | 42.86 | 30.91 |
| CDX72138 | Canola | mitochondrion | 37.82 | 30.2 |
| CDY27215 | Canola | mitochondrion | 37.82 | 30.2 |
| CDY67121 | Canola | mitochondrion | 37.82 | 29.61 |
| CDY23543 | Canola | cytosol | 34.45 | 29.29 |
| CDX67647 | Canola | mitochondrion | 36.97 | 29.14 |
| CDY32015 | Canola | mitochondrion | 36.97 | 29.14 |
| CDY48387 | Canola | cytosol | 34.45 | 29.08 |
| CDY03743 | Canola | extracellular | 21.01 | 29.07 |
| CDX73940 | Canola | cytosol | 32.77 | 27.86 |
| CDY38768 | Canola | cytosol, plastid | 35.29 | 27.81 |
| CDY11645 | Canola | cytosol, plastid | 35.29 | 27.81 |
| CDY37032 | Canola | cytosol | 42.86 | 27.27 |
| CDY58647 | Canola | cytosol | 31.93 | 27.14 |
| CDY35999 | Canola | cytosol | 31.93 | 27.14 |
| CDY23544 | Canola | cytosol | 33.61 | 27.03 |
| CDY48388 | Canola | cytosol | 32.77 | 26.53 |
| CDY22165 | Canola | cytosol | 31.93 | 26.03 |
| CDY04457 | Canola | cytosol | 21.01 | 25.51 |
| CDY53739 | Canola | plastid | 33.61 | 22.1 |
| CDY38116 | Canola | plastid | 34.45 | 21.93 |
| CDY69984 | Canola | plastid | 33.61 | 21.51 |
| CDY51539 | Canola | plastid | 31.09 | 20.56 |
| CDY28704 | Canola | plastid | 31.09 | 20.56 |
| CDY27984 | Canola | nucleus | 31.93 | 18.01 |
| CDY00656 | Canola | cytosol | 31.93 | 10.19 |
| CDY11641 | Canola | plastid | 17.65 | 10.14 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | Gene3D:3.40.30.10 | GO:A0A078HLL8 | UniProt:A0A078HLL8 | EnsemblPlants:CDY39355 |
| ProteinID:CDY39355 | ProteinID:CDY39355.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00067796001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 |
| PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | SUPFAM:SSF52833 |
| TIGRFAMs:TIGR01068 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EB73A5 |
Description
BnaC05g15320DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078HLL8]
Coordinates
chrLK032446:+:174276..175211
Molecular Weight (calculated)
12899.6 Da
IEP (calculated)
5.098
GRAVY (calculated)
0.240
Length
119 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEEGQVIG CHANDVWAVQ LDTAKQSNKL IVIDFTASWC PPCRMIAPVF ADLAKKFMSS AIFFKVDVDE LQSVAQEFGV EAMPTFVFIK DGNVVDKVVG
101: ARKEDLHATI AKHTGVATA
101: ARKEDLHATI AKHTGVATA
001: MAAEEGQVIG CHTNDVWTVQ LDKAKESNKL IVIDFTASWC PPCRMIAPIF NDLAKKFMSS AIFFKVDVDE LQSVAKEFGV EAMPTFVFIK AGEVVDKLVG
101: ANKEDLQAKI VKHTGVTTA
101: ANKEDLQAKI VKHTGVTTA
Arabidopsis Description
TRX4Thioredoxin H4 [Source:UniProtKB/Swiss-Prot;Acc:Q39239]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.