Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014037.1-P | Field mustard | cytosol | 98.31 | 98.31 |
| CDY53958 | Canola | cytosol | 90.68 | 91.45 |
| AT1G45145.1 | Thale cress | cytosol | 83.05 | 83.05 |
| CDY32970 | Canola | cytosol | 66.1 | 63.41 |
| CDY39355 | Canola | cytosol | 63.56 | 63.03 |
| CDY43592 | Canola | cytosol | 65.25 | 62.6 |
| CDY29406 | Canola | cytosol | 62.71 | 62.18 |
| CDX77974 | Canola | cytosol | 56.78 | 58.77 |
| CDX90669 | Canola | cytosol | 56.78 | 58.77 |
| CDY28996 | Canola | cytosol | 56.78 | 58.77 |
| Zm00001d038652_P003 | Maize | cytosol | 63.56 | 58.59 |
| TraesCS1B01G339000.1 | Wheat | cytosol | 57.63 | 57.63 |
| OQU78269 | Sorghum | cytosol | 61.02 | 57.14 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 57.63 | 57.14 |
| CDY34470 | Canola | cytosol | 27.97 | 56.9 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 58.47 | 56.56 |
| TraesCS1B01G338800.1 | Wheat | cytosol, golgi, plastid, unclear | 57.63 | 53.54 |
| TraesCS1A01G325600.1 | Wheat | cytosol | 57.63 | 52.31 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 44.92 | 46.9 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 40.68 | 45.28 |
| CDY65333 | Canola | cytosol | 44.07 | 39.1 |
| CDX67442 | Canola | cytosol | 43.22 | 38.06 |
| CDY27290 | Canola | cytosol | 35.59 | 32.81 |
| CDY23543 | Canola | cytosol | 38.14 | 32.14 |
| CDY48387 | Canola | cytosol | 38.14 | 31.91 |
| CDY34646 | Canola | cytosol | 33.9 | 31.75 |
| CDY30901 | Canola | cytosol | 33.9 | 31.25 |
| CDY45144 | Canola | cytosol | 33.9 | 31.25 |
| CDX73752 | Canola | cytosol, mitochondrion | 56.78 | 30.45 |
| CDY48388 | Canola | cytosol | 37.29 | 29.93 |
| CDY23544 | Canola | cytosol | 37.29 | 29.73 |
| CDY57101 | Canola | cytosol | 41.53 | 29.7 |
| CDY70695 | Canola | cytosol | 33.9 | 28.99 |
| CDY03743 | Canola | extracellular | 20.34 | 27.91 |
| CDY35999 | Canola | cytosol | 33.05 | 27.86 |
| CDY67121 | Canola | mitochondrion | 35.59 | 27.63 |
| CDY32015 | Canola | mitochondrion | 34.75 | 27.15 |
| CDX67647 | Canola | mitochondrion | 34.75 | 27.15 |
| CDX73940 | Canola | cytosol | 32.2 | 27.14 |
| CDY22165 | Canola | cytosol | 33.05 | 26.71 |
| CDY38768 | Canola | cytosol, plastid | 33.9 | 26.49 |
| CDY11645 | Canola | cytosol, plastid | 33.9 | 26.49 |
| CDY37032 | Canola | cytosol | 41.53 | 26.2 |
| CDY58647 | Canola | cytosol | 30.51 | 25.71 |
| CDX72138 | Canola | mitochondrion | 32.2 | 25.5 |
| CDY27215 | Canola | mitochondrion | 32.2 | 25.5 |
| CDY04457 | Canola | cytosol | 20.34 | 24.49 |
| CDY69984 | Canola | plastid | 29.66 | 18.82 |
| CDY53739 | Canola | plastid | 28.81 | 18.78 |
| CDY27984 | Canola | nucleus | 33.05 | 18.48 |
| CDY28704 | Canola | plastid | 27.97 | 18.33 |
| CDY38116 | Canola | plastid | 28.81 | 18.18 |
| CDY51539 | Canola | plastid | 27.12 | 17.78 |
| CDY11641 | Canola | plastid | 19.49 | 11.11 |
| CDY00656 | Canola | cytosol | 31.36 | 9.92 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | Gene3D:3.40.30.10 | GO:A0A078HF64 | UniProt:A0A078HF64 | EnsemblPlants:CDY36029 |
| ProteinID:CDY36029 | ProteinID:CDY36029.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 |
| GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00059839001 | InterPro:IPR013766 | PFAM:PF00085 | PIRSF:PIRSF000077 |
| PRINTS:PR00421 | ScanProsite:PS00194 | PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | SUPFAM:SSF52833 |
| InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf | InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0004EEEE9F | : |
Description
BnaA08g04320DThioredoxin [Source:UniProtKB/TrEMBL;Acc:A0A078HF64]
Coordinates
chrLK032365:-:373506..373998
Molecular Weight (calculated)
13273.4 Da
IEP (calculated)
6.254
GRAVY (calculated)
0.222
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGEGEVIAC HTLEVWSEKI KAANESKKLI VIDFTAIWCP PCRFIAPVFV DMAKKFLNVV FFKIDVDELQ SVAKEFKVEA MPTFLFMREG EVVDRVVGAR
101: KEEIHQTLMK HGGLVSSA
101: KEEIHQTLMK HGGLVSSA
001: MAGEGEVIAC HTLEVWNEKV KDANESKKLI VIDFTASWCP PCRFIAPVFA EMAKKFTNVV FFKIDVDELQ AVAQEFKVEA MPTFVFMKEG NIIDRVVGAA
101: KDEINEKLMK HGGLVASA
101: KDEINEKLMK HGGLVASA
Arabidopsis Description
TRX5Thioredoxin H5 [Source:UniProtKB/Swiss-Prot;Acc:Q39241]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.