Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027469.1-P | Field mustard | cytosol | 98.37 | 98.37 |
| CDY32970 | Canola | cytosol | 98.37 | 98.37 |
| AT5G42980.1 | Thale cress | cytosol | 73.98 | 77.12 |
| CDY53958 | Canola | cytosol | 65.04 | 68.38 |
| CDY36029 | Canola | cytosol | 62.6 | 65.25 |
| CDY29406 | Canola | cytosol | 59.35 | 61.34 |
| CDY39355 | Canola | cytosol | 59.35 | 61.34 |
| TraesCS1D01G327500.1 | Wheat | cytosol, plastid | 54.47 | 56.3 |
| TraesCS1B01G339000.1 | Wheat | cytosol | 53.66 | 55.93 |
| CDY34470 | Canola | cytosol | 26.02 | 55.17 |
| CDY28996 | Canola | cytosol | 50.41 | 54.39 |
| CDX90669 | Canola | cytosol | 50.41 | 54.39 |
| CDX77974 | Canola | cytosol | 50.41 | 54.39 |
| HORVU1Hr1G075560.1 | Barley | cytosol | 52.03 | 52.46 |
| OQU78269 | Sorghum | cytosol | 52.85 | 51.59 |
| TraesCS1B01G338800.1 | Wheat | cytosol, golgi, plastid, unclear | 52.85 | 51.18 |
| TraesCS1A01G325600.1 | Wheat | cytosol | 52.85 | 50.0 |
| Zm00001d038652_P003 | Maize | cytosol | 52.03 | 50.0 |
| TraesCS7A01G562100.1 | Wheat | cytosol | 39.02 | 45.28 |
| TraesCS7D01G001000.1 | Wheat | cytosol | 38.21 | 41.59 |
| CDY65333 | Canola | cytosol | 43.09 | 39.85 |
| CDX67442 | Canola | cytosol | 42.28 | 38.81 |
| CDY27290 | Canola | cytosol | 36.59 | 35.16 |
| CDY45144 | Canola | cytosol | 35.77 | 34.38 |
| CDY30901 | Canola | cytosol | 34.96 | 33.59 |
| CDY34646 | Canola | cytosol | 33.33 | 32.54 |
| CDY23543 | Canola | cytosol | 36.59 | 32.14 |
| CDY48387 | Canola | cytosol | 36.59 | 31.91 |
| CDY57101 | Canola | cytosol | 42.28 | 31.52 |
| CDY35999 | Canola | cytosol | 35.77 | 31.43 |
| CDY23544 | Canola | cytosol | 37.4 | 31.08 |
| CDY22165 | Canola | cytosol | 36.59 | 30.82 |
| CDX73940 | Canola | cytosol | 34.96 | 30.71 |
| CDY58647 | Canola | cytosol | 34.96 | 30.71 |
| CDY48388 | Canola | cytosol | 35.77 | 29.93 |
| CDY38768 | Canola | cytosol, plastid | 36.59 | 29.8 |
| CDY11645 | Canola | cytosol, plastid | 36.59 | 29.8 |
| CDY70695 | Canola | cytosol | 32.52 | 28.99 |
| CDY27215 | Canola | mitochondrion | 34.96 | 28.86 |
| CDX72138 | Canola | mitochondrion | 34.96 | 28.86 |
| CDX73752 | Canola | cytosol, mitochondrion | 50.41 | 28.18 |
| CDY03743 | Canola | extracellular | 19.51 | 27.91 |
| CDY37032 | Canola | cytosol | 42.28 | 27.81 |
| CDY67121 | Canola | mitochondrion | 34.15 | 27.63 |
| CDX67647 | Canola | mitochondrion | 32.52 | 26.49 |
| CDY32015 | Canola | mitochondrion | 32.52 | 26.49 |
| CDY04457 | Canola | cytosol | 19.51 | 24.49 |
| CDY38116 | Canola | plastid | 33.33 | 21.93 |
| CDY69984 | Canola | plastid | 32.52 | 21.51 |
| CDY27984 | Canola | nucleus | 35.77 | 20.85 |
| CDY53739 | Canola | plastid | 29.27 | 19.89 |
| CDY51539 | Canola | plastid | 27.64 | 18.89 |
| CDY28704 | Canola | plastid | 27.64 | 18.89 |
| CDY00656 | Canola | cytosol | 34.15 | 11.26 |
| CDY11641 | Canola | plastid | 17.89 | 10.63 |
Protein Annotations
| MapMan:10.6.1 | MapMan:18.7.2 | Gene3D:3.40.30.10 | GO:A0A078I0G6 | UniProt:A0A078I0G6 | unigene:Bna.2151 |
| EnsemblPlants:CDY43592 | ProteinID:CDY43592 | ProteinID:CDY43592.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006662 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0015035 | GO:GO:0019725 | GO:GO:0045454 | GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00076902001 |
| InterPro:IPR013766 | UniProt:P68177 | PFAM:PF00085 | PIRSF:PIRSF000077 | PRINTS:PR00421 | ScanProsite:PS00194 |
| PFscan:PS51352 | PANTHER:PTHR10438 | PANTHER:PTHR10438:SF293 | SUPFAM:SSF52833 | InterPro:Thioredoxin | InterPro:Thioredoxin-like_sf |
| InterPro:Thioredoxin_CS | InterPro:Thioredoxin_domain | UniParc:UPI0000136D60 | : | : | : |
Description
BnaC09g17310DThioredoxin H-type 1 [Source:UniProtKB/Swiss-Prot;Acc:P68177]
Coordinates
chrLK032562:+:39053..40190
Molecular Weight (calculated)
13573.5 Da
IEP (calculated)
4.954
GRAVY (calculated)
0.215
Length
123 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATAEVIPA GEVIACHTVE DWNNKLKAAK ESNKLIVIDF TAVWCPPCRF IAPIFVELAK KHLDVVFFKV DVDELATVAQ EFDVQAMPTF VYMKGEEKLD
101: KVVGAAKEEI EAKLLKHSQV AAA
101: KVVGAAKEEI EAKLLKHSQV AAA
001: MAAEGEVIAC HTVEDWTEKL KAANESKKLI VIDFTATWCP PCRFIAPVFA DLAKKHLDVV FFKVDVDELN TVAEEFKVQA MPTFIFMKEG EIKETVVGAA
101: KEEIIANLEK HKTVVAAA
101: KEEIIANLEK HKTVVAAA
Arabidopsis Description
TRX3Thioredoxin H3 [Source:UniProtKB/Swiss-Prot;Acc:Q42403]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.