Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 9
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G43560.1 | CDY32970 | AT5G42980.1 | 15352244 |
| AT2G43560.1 | CDY43592 | AT5G42980.1 | 15352244 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037701.1-P | Field mustard | plastid | 97.69 | 97.69 |
| CDY30419 | Canola | plastid | 97.69 | 97.69 |
| AT2G43560.1 | Thale cress | plastid | 88.89 | 86.1 |
| VIT_05s0094g00100.t01 | Wine grape | plastid | 73.15 | 68.4 |
| KRH24569 | Soybean | plastid | 72.22 | 67.24 |
| KRH29576 | Soybean | plastid | 71.3 | 66.38 |
| Solyc04g015040.2.1 | Tomato | plastid | 68.52 | 62.98 |
| PGSC0003DMT400038848 | Potato | plastid | 67.59 | 62.13 |
| Zm00001d031696_P002 | Maize | plastid | 66.67 | 61.54 |
| GSMUA_Achr7P23820_001 | Banana | plastid | 65.28 | 59.75 |
| EES15264 | Sorghum | plastid | 65.74 | 58.68 |
| TraesCS7D01G268300.1 | Wheat | plastid | 63.43 | 58.3 |
| Os08t0541400-01 | Rice | plastid | 64.81 | 53.64 |
| TraesCS7A01G266500.2 | Wheat | plastid | 54.17 | 43.66 |
| TraesCS7B01G166000.2 | Wheat | plastid | 52.31 | 42.64 |
| HORVU7Hr1G056240.7 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 52.31 | 34.98 |
| CDY62066 | Canola | endoplasmic reticulum | 25.0 | 29.51 |
| CDY13042 | Canola | plastid | 25.93 | 27.05 |
| CDY05669 | Canola | endoplasmic reticulum, extracellular, golgi | 20.37 | 26.99 |
| CDY67189 | Canola | endoplasmic reticulum | 18.98 | 26.62 |
| CDY52280 | Canola | endoplasmic reticulum | 18.98 | 26.62 |
| CDY51059 | Canola | endoplasmic reticulum | 20.37 | 26.51 |
| CDY15105 | Canola | endoplasmic reticulum | 18.98 | 26.45 |
| CDX85349 | Canola | endoplasmic reticulum | 19.44 | 26.25 |
| CDX86294 | Canola | endoplasmic reticulum | 19.44 | 25.77 |
| CDY42648 | Canola | plastid | 18.52 | 20.0 |
| CDY42000 | Canola | plastid | 18.52 | 20.0 |
| CDY11786 | Canola | cytosol | 16.2 | 13.57 |
| CDX94456 | Canola | nucleus | 19.91 | 11.29 |
| CDX92695 | Canola | nucleus | 22.69 | 10.99 |
| CDY49705 | Canola | nucleus | 22.69 | 10.68 |
| CDX89421 | Canola | nucleus | 22.22 | 10.39 |
| CDY27659 | Canola | plastid | 21.3 | 9.85 |
| CDX99700 | Canola | endoplasmic reticulum, vacuole | 21.76 | 9.46 |
| CDY61640 | Canola | nucleus | 12.96 | 7.57 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | GO:A0A078GDC5 | UniProt:A0A078GDC5 | EnsemblPlants:CDY23379 | ProteinID:CDY23379 |
| ProteinID:CDY23379.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00021981001 |
| InterPro:IPR001179 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR43811 |
| PANTHER:PTHR43811:SF17 | SUPFAM:SSF54534 | UniParc:UPI0004EE6F4D | SEG:seg | : | : |
Description
BnaC04g49070DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078GDC5]
Coordinates
chrLK032143:-:212402..214589
Molecular Weight (calculated)
22925.9 Da
IEP (calculated)
8.586
GRAVY (calculated)
-0.089
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASSSPSLL LPLGSASRNG TTIKTPRCIS TRVILASETR NKSCSRRDAM LLVLGVSGLS MNYLPAAYAA GLPPEDKPRL CEAECEKELE NVPMVTTESG
101: LQYKDIKVGK GPSPPVGYQV AANYVAMVPS GQIFDSSLEK GLPYLFRVGS GQVIKGLDEG LLTMKAGGKR RLYIPGPLAF PKGLVSAPGR PRVAPNSPVV
201: FDVSLEYIPG LESDEE
101: LQYKDIKVGK GPSPPVGYQV AANYVAMVPS GQIFDSSLEK GLPYLFRVGS GQVIKGLDEG LLTMKAGGKR RLYIPGPLAF PKGLVSAPGR PRVAPNSPVV
201: FDVSLEYIPG LESDEE
001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
Arabidopsis Description
FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.