Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 3
- golgi 3
- plasma membrane 3
- endoplasmic reticulum 4
- vacuole 3
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra017596.1-P | Field mustard | plastid | 92.35 | 81.64 |
| CDY13042 | Canola | plastid | 92.35 | 81.64 |
| AT5G45680.1 | Thale cress | plastid | 84.7 | 74.52 |
| VIT_01s0011g00930.t01 | Wine grape | plastid | 68.85 | 58.33 |
| KRH42434 | Soybean | plastid | 62.84 | 53.24 |
| PGSC0003DMT400067618 | Potato | cytosol, plastid | 64.48 | 52.21 |
| GSMUA_Achr8P06890_001 | Banana | plastid | 59.02 | 48.21 |
| Zm00001d046940_P001 | Maize | plastid | 55.19 | 47.42 |
| Os06t0663800-01 | Rice | extracellular | 55.19 | 46.33 |
| TraesCS7B01G388800.1 | Wheat | plastid | 50.82 | 45.81 |
| TraesCS7D01G472600.1 | Wheat | plastid | 50.27 | 45.32 |
| TraesCS7A01G485300.1 | Wheat | plastid | 50.27 | 45.32 |
| Solyc08g006540.2.1 | Tomato | plastid | 63.93 | 44.49 |
| HORVU7Hr1G109380.4 | Barley | plastid | 49.18 | 41.67 |
| OQU76834 | Sorghum | mitochondrion, plastid | 53.55 | 34.51 |
| CDY05669 | Canola | endoplasmic reticulum, extracellular, golgi | 28.42 | 31.9 |
| CDX85349 | Canola | endoplasmic reticulum | 27.87 | 31.88 |
| CDY67189 | Canola | endoplasmic reticulum | 26.78 | 31.82 |
| CDY52280 | Canola | endoplasmic reticulum | 26.78 | 31.82 |
| CDY15105 | Canola | endoplasmic reticulum | 26.78 | 31.61 |
| CDY51059 | Canola | endoplasmic reticulum | 27.87 | 30.72 |
| CDX86294 | Canola | endoplasmic reticulum | 27.32 | 30.67 |
| CDY42648 | Canola | plastid | 30.6 | 28.0 |
| CDY42000 | Canola | plastid | 30.6 | 28.0 |
| CDY30419 | Canola | plastid | 29.51 | 25.0 |
| CDY23379 | Canola | plastid | 29.51 | 25.0 |
| CDY11786 | Canola | cytosol | 21.86 | 15.5 |
| CDX94456 | Canola | nucleus | 30.05 | 14.44 |
| CDX89421 | Canola | nucleus | 30.6 | 12.12 |
| CDX92695 | Canola | nucleus | 29.51 | 12.11 |
| CDY49705 | Canola | nucleus | 28.96 | 11.55 |
| CDY27659 | Canola | plastid | 25.68 | 10.06 |
| CDX99700 | Canola | endoplasmic reticulum, vacuole | 25.14 | 9.26 |
| CDY61640 | Canola | nucleus | 16.39 | 8.11 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | GO:A0A078JA44 | UniProt:A0A078JA44 | EnsemblPlants:CDY62066 | ProteinID:CDY62066 |
| ProteinID:CDY62066.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00035907001 |
| InterPro:IPR001179 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 |
| PANTHER:PTHR10516:SF269 | SUPFAM:SSF54534 | UniParc:UPI0004EF0DAF | SEG:seg | : | : |
Description
BnaC06g43370DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078JA44]
Coordinates
chrLK034090:-:18531..19715
Molecular Weight (calculated)
19424.7 Da
IEP (calculated)
8.572
GRAVY (calculated)
0.215
Length
183 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGIRDKIKI IYIYIYIVSD HELSFVQPAS CGRREAIIGF GFCIGLVDNV SALAETSSCE FSVSPSGLAF CDKVVGYGPA AVKGQLIKAH YVGKLENGKV
101: FDSSYNRGKP LTFRIGVGEV IKGWDQGIIG SDGVPAMLTG GKRTLKIPPE LAYGDRGAGC KGGSCLIPPA SVLLFDIEFI GKA
101: FDSSYNRGKP LTFRIGVGEV IKGWDQGIIG SDGVPAMLTG GKRTLKIPPE LAYGDRGAGC KGGSCLIPPA SVLLFDIEFI GKA
001: MSSLGFSVGT CSPPSEKRKC RFLVNNSLNK AEAINLRNKQ KVSSDPELSF AQLSSCGRRE AIIGFGFSIG LLDNVSALAE TTSCEFSVSP SGLAFCDKVV
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
Arabidopsis Description
FKBP13Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.