Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 7
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86294 | Canola | endoplasmic reticulum | 96.88 | 95.09 |
| AT5G48580.1 | Thale cress | endoplasmic reticulum, extracellular | 88.75 | 87.12 |
| CDY05669 | Canola | endoplasmic reticulum, extracellular, golgi | 86.25 | 84.66 |
| CDY51059 | Canola | endoplasmic reticulum | 86.88 | 83.73 |
| CDY52280 | Canola | endoplasmic reticulum | 68.12 | 70.78 |
| CDY15105 | Canola | endoplasmic reticulum | 68.12 | 70.32 |
| CDY67189 | Canola | endoplasmic reticulum | 66.88 | 69.48 |
| EES04100 | Sorghum | endoplasmic reticulum | 65.0 | 67.1 |
| Zm00001d042372_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 64.38 | 66.45 |
| Os01t0915800-01 | Rice | plasma membrane | 64.38 | 65.19 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 63.12 | 64.33 |
| TraesCS3D01G417400.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 61.88 | 63.46 |
| TraesCS3B01G457500.1 | Wheat | endoplasmic reticulum, golgi | 62.5 | 63.29 |
| TraesCS3A01G421300.1 | Wheat | extracellular | 51.88 | 53.21 |
| Zm00001d012064_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 58.75 | 50.54 |
| TraesCS3A01G422000.2 | Wheat | endoplasmic reticulum, golgi, vacuole | 60.62 | 48.26 |
| CDY62066 | Canola | endoplasmic reticulum | 31.88 | 27.87 |
| CDY13042 | Canola | plastid | 32.5 | 25.12 |
| CDY23379 | Canola | plastid | 26.25 | 19.44 |
| CDY30419 | Canola | plastid | 26.25 | 19.44 |
| CDY42000 | Canola | plastid | 23.12 | 18.5 |
| CDY42648 | Canola | plastid | 22.5 | 18.0 |
| CDY11786 | Canola | cytosol | 21.88 | 13.57 |
| CDX94456 | Canola | nucleus | 30.62 | 12.86 |
| CDX92695 | Canola | nucleus | 32.5 | 11.66 |
| CDY49705 | Canola | nucleus | 31.88 | 11.11 |
| CDX89421 | Canola | nucleus | 31.25 | 10.82 |
| CDY27659 | Canola | plastid | 27.5 | 9.42 |
| CDX99700 | Canola | endoplasmic reticulum, vacuole | 26.88 | 8.65 |
| CDY61640 | Canola | nucleus | 14.38 | 6.22 |
Protein Annotations
| EnsemblPlants:CDX85349 | EnsemblPlantsGene:GSBRNA2T00143021001 | Gene3D:3.10.50.40 | GO:A0A078DAN5 | InterPro:IPR001179 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | ncoils:Coil | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 | PFAM:PF00254 | PFscan:PS50059 |
| ProteinID:CDX85349 | ProteinID:CDX85349.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF54534 | UniParc:UPI0004EE21D5 |
| MapMan:18.12.2 | : | : | : | : | : |
Description
BnaC07g26600D
Coordinates
chrLK031841:-:1352130..1353526
Molecular Weight (calculated)
17433.8 Da
IEP (calculated)
4.488
GRAVY (calculated)
-0.296
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLRYSLCLI LFSLISLQGF AKKTGDVSEL QIGVKFKPAT CEVKAHKGDM IKVHYRGKLT DGTVFDSSFE RDEPFEFELG SGQVIKGWDQ GLLGACVGEK
101: RKLKIPAKLG YGEQGSPPTI PGGATLIFDT ELIAVNEKPA GGEQEQEEED VDDTYGADEL
101: RKLKIPAKLG YGEQGSPPTI PGGATLIFDT ELIAVNEKPA GGEQEQEEED VDDTYGADEL
001: MASKMSLRYS LFLIFFSLIS LQGFAKKTGD VSELQIGVKF KPKTCEVQAH KGDTIKVHYR GKLTDGTVFD SSFERGDPFE FKLGSGQVIK GWDQGLLGAC
101: VGEKRKLKIP AKLGYGEQGS PPTIPGGATL IFDTELIAVN EKPAGGEEYG GDEDDEGYGN DEL
101: VGEKRKLKIP AKLGYGEQGS PPTIPGGATL IFDTELIAVN EKPAGGEEYG GDEDDEGYGN DEL
Arabidopsis Description
FKBP15-2Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UPA7]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.