Factsheet for Zm00001d012064_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04100	Sorghum	endoplasmic reticulum	72.58	87.1
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	71.51	85.81
TraesCS3B01G457500.1	Wheat	endoplasmic reticulum, golgi	68.28	80.38
HORVU3Hr1G093290.1	Barley	endoplasmic reticulum	67.74	80.25
TraesCS3D01G417400.1	Wheat	endoplasmic reticulum, extracellular, golgi	67.2	80.13
Os01t0915800-01	Rice	plasma membrane	66.67	78.48
VIT_00s0260g00060.t01	Wine grape	endoplasmic reticulum	54.3	68.24
GSMUA_Achr7P22790_001	Banana	endoplasmic reticulum	55.38	67.76
TraesCS3A01G421300.1	Wheat	extracellular	55.91	66.67
TraesCS3A01G422000.2	Wheat	endoplasmic reticulum, golgi, vacuole	69.35	64.18
Zm00001d021021_P001	Maize	endoplasmic reticulum	53.76	61.35
AT5G48580.1	Thale cress	endoplasmic reticulum, extracellular	51.61	58.9
CDX85349	Canola	endoplasmic reticulum	50.54	58.75
CDY05669	Canola	endoplasmic reticulum, extracellular, golgi	51.08	58.28
CDY51059	Canola	endoplasmic reticulum	51.08	57.23
CDX86294	Canola	endoplasmic reticulum	48.92	55.83
Bra037476.1-P	Field mustard	endoplasmic reticulum	48.92	55.83
Bra020690.1-P	Field mustard	endoplasmic reticulum	49.46	55.09
Zm00001d046940_P001	Maize	plastid	27.96	24.41
Zm00001d018077_P002	Maize	plastid	22.58	18.58
Zm00001d031696_P002	Maize	plastid	22.04	17.52
Zm00001d003535_P001	Maize	nucleus	12.9	17.14
Zm00001d025522_P001	Maize	plasma membrane	27.96	10.51
Zm00001d019987_P001	Maize	cytosol	22.04	9.23
Zm00001d005534_P001	Maize	nucleus	16.67	8.31

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A1D6G6B1	ProteinID:AQK98730.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PFscan:PS51257	PANTHER:PTHR10516	PANTHER:PTHR10516:SF293	SUPFAM:SSF54534	TMHMM:TMhelix
UniParc:UPI0008427D3B	EnsemblPlantsGene:Zm00001d012064	EnsemblPlants:Zm00001d012064_P001	EnsemblPlants:Zm00001d012064_T001	SEG:seg	:

Description

Peptidyl-prolyl cis-trans isomerase

Coordinates

chr8:+:167543593..167547578

Molecular Weight (calculated)

19846.0 Da

IEP (calculated)

9.186

GRAVY (calculated)

-0.287

Length

186 amino acids

Sequence
(BLAST)

001: MGKKRQLICL AAAVAAAAIL LTGTACMWSA GGNIPRQGVV KDHSDVGPSN KHMHPVEFQL PHARARVLYL YKPESCTLQA HKGDKIKVHY RGALTDGSVF
101: DSGYDRGDPF EFTLGNGQVI KGWDQGLLGM CVGEKRKLKI PAKMGYGERG SPPKIPGGAT LVFDTELIAV NGKTSGGANP ETESEL

Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)

001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL

Arabidopsis Description

FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.