Factsheet for Zm00001d021021_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER99137	Sorghum	endoplasmic reticulum	86.5	94.63
TraesCS5A01G279500.1	Wheat	endoplasmic reticulum, extracellular, golgi	79.14	84.87
TraesCS5D01G286500.1	Wheat	golgi	78.53	84.21
TraesCS5B01G278800.1	Wheat	endoplasmic reticulum, golgi	78.53	84.21
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	79.14	83.77
Os09t0501850-01	Rice	plasma membrane	79.14	83.77
VIT_00s0260g00060.t01	Wine grape	endoplasmic reticulum	70.55	77.7
GSMUA_Achr7P22790_001	Banana	endoplasmic reticulum	69.94	75.0
KRH66149	Soybean	endoplasmic reticulum	66.87	74.15
Solyc09g057670.2.1	Tomato	extracellular	65.64	71.81
KRH07427	Soybean	endoplasmic reticulum	67.48	71.43
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	67.48	70.97
PGSC0003DMT400022512	Potato	extracellular	63.8	69.8
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	61.35	53.76
Zm00001d046940_P001	Maize	plastid	31.29	23.94
Zm00001d018077_P002	Maize	plastid	27.61	19.91
Zm00001d031696_P002	Maize	plastid	25.77	17.95
Zm00001d003535_P001	Maize	nucleus	14.11	16.43
Zm00001d025522_P001	Maize	plasma membrane	34.36	11.31
Zm00001d019987_P001	Maize	cytosol	27.61	10.14
Zm00001d005534_P001	Maize	nucleus	20.86	9.12

Protein Annotations

EntrezGene:100282031	MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A1D6I7Y2	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	ProteinID:ONM56156.1	PFAM:PF00254	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF293	SUPFAM:SSF54534	SignalP:SignalP-noTM
UniParc:UPI000844F931	EnsemblPlantsGene:Zm00001d021021	EnsemblPlants:Zm00001d021021_P001	EnsemblPlants:Zm00001d021021_T001	:	:

Description

Peptidyl-prolyl cis-trans isomerase

Coordinates

chr7:-:140562622..140567401

Molecular Weight (calculated)

17449.1 Da

IEP (calculated)

7.339

GRAVY (calculated)

-0.202

Length

163 amino acids

Sequence
(BLAST)

001: MAKPQLLLCF LLAASAPLIV ATAKKSGDVS ELQIGVKAGS YIDAMPGYFK MQYKPESCSI QAHKGDKVKV HYRGKLTDGT VFDSSYERGD PIEFELGTGQ
101: VIKGWDQGLL GMCVGEKRKL KIPSKLGYGP QGSPPTIPGG ATLIFDTELV AVNGEPTNQS DEL

Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)

001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL

Arabidopsis Description

FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.