Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 8
- vacuole 5
- plasma membrane 5
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G286500.1 | Wheat | golgi | 95.45 | 96.71 |
| TraesCS5B01G278800.1 | Wheat | endoplasmic reticulum, golgi | 95.45 | 96.71 |
| TraesCS5A01G279500.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 95.45 | 96.71 |
| Os09t0501850-01 | Rice | plasma membrane | 88.31 | 88.31 |
| EER99137 | Sorghum | endoplasmic reticulum | 84.42 | 87.25 |
| Zm00001d021021_P001 | Maize | endoplasmic reticulum | 83.77 | 79.14 |
| VIT_00s0260g00060.t01 | Wine grape | endoplasmic reticulum | 74.68 | 77.7 |
| GSMUA_Achr7P22790_001 | Banana | endoplasmic reticulum | 74.03 | 75.0 |
| KRH66149 | Soybean | endoplasmic reticulum | 68.83 | 72.11 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 72.73 | 71.34 |
| Solyc09g057670.2.1 | Tomato | extracellular | 66.88 | 69.13 |
| PGSC0003DMT400022512 | Potato | extracellular | 66.23 | 68.46 |
| KRH07427 | Soybean | endoplasmic reticulum | 67.53 | 67.53 |
| HORVU7Hr1G109380.4 | Barley | plastid | 35.06 | 25.0 |
| HORVU6Hr1G075080.2 | Barley | plastid | 27.92 | 18.22 |
| HORVU7Hr1G056240.7 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 25.32 | 12.07 |
| HORVU2Hr1G078350.3 | Barley | nucleus | 35.71 | 11.16 |
| HORVU5Hr1G049560.12 | Barley | nucleus | 27.92 | 9.31 |
| HORVU6Hr1G023790.2 | Barley | cytosol, nucleus | 11.69 | 6.59 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EMBL:AK360780 | EMBL:AK366894 | UniProt:F2DA67 | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | EnsemblPlantsGene:HORVU5Hr1G075490 | EnsemblPlants:HORVU5Hr1G075490.3 | InterPro:IPR001179 |
| PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 |
| SUPFAM:SSF54534 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0000212EAF | SEG:seg | : |
Description
Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:F2DA67]
Coordinates
chrchr5H:+:547240792..547243210
Molecular Weight (calculated)
16178.4 Da
IEP (calculated)
5.233
GRAVY (calculated)
-0.066
Length
154 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKPGLLLCL LVVAAALLLV ASAKKSGDVS ALQIGVKYKP ESCSISAHKG DRVKVHYRGT LTDGTVFDSS YERGDPIEFE LGTGQVIKGW DQGILGMCIG
101: EKRKLKIPSK LGYGDQGSPP TIPGGATLIF DTELVAVNGE PSSKSDEDVA DSDL
101: EKRKLKIPSK LGYGDQGSPP TIPGGATLIF DTELVAVNGE PSSKSDEDVA DSDL
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.