Skip to main content
crop-pal logo
Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 9
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
EpiLoc:endoplasmic reticulum
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Plant-mPloc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
endoplasmic reticulum: 21087465
plasma membrane: 27800704
plasma membrane: 28056797
gfp PMID: 21087465 doi
JC Ahn, DW Kim, YN You, MS Seok, JM Park, H Hwang, BG Kim, S Luan, HS Park, HS Cho
Plant Systems Engineering Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-506, Korea.
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID: 28056797 doi
N Yang, T Wang
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G278800.1 Wheat endoplasmic reticulum, golgi 88.31 89.47
EER99137 Sorghum endoplasmic reticulum 86.36 89.26
TraesCS5A01G279500.1 Wheat endoplasmic reticulum, extracellular, golgi 87.66 88.82
HORVU5Hr1G075490.3 Barley endoplasmic reticulum, extracellular, golgi 88.31 88.31
TraesCS5D01G286500.1 Wheat golgi 87.01 88.16
VIT_00s0260g00060.t01 Wine grape endoplasmic reticulum 77.27 80.41
Zm00001d021021_P001 Maize endoplasmic reticulum 83.77 79.14
GSMUA_Achr7P22790_001 Banana endoplasmic reticulum 75.97 76.97
KRH66149 Soybean endoplasmic reticulum 71.43 74.83
KRH07427 Soybean endoplasmic reticulum 71.43 71.43
PGSC0003DMT400022512 Potato extracellular 68.83 71.14
Solyc09g057670.2.1 Tomato extracellular 68.18 70.47
Os01t0915800-01 Rice plasma membrane 70.78 68.99
Os06t0663800-01 Rice extracellular 35.06 24.77
Os02t0751600-01 Rice plastid 29.87 20.0
Os08t0541400-01 Rice plastid 29.22 17.24
Os04t0446500-02 Rice nucleus 37.01 10.86
Os09t0293900-01 Rice nucleus 29.22 10.61
Os09t0103800-00 Rice cytosol 33.12 9.81
Protein Annotations
MapMan:18.12.2Gene3D:3.10.50.40EntrezGene:9269317UniProt:A3C0C6EMBL:AK063115ProteinID:BAH94656.1
ProteinID:BAT08820.1ProteinID:EAZ45265.1GO:GO:0000413GO:GO:0003674GO:GO:0003755GO:GO:0003824
GO:GO:0005488GO:GO:0005528GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016853GO:GO:0019538
GO:GO:0061077InterPro:IPR001179EnsemblPlantsGene:Os09g0501850EnsemblPlants:Os09t0501850-01PFAM:PF00254InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_domPFscan:PS50059PANTHER:PTHR10516PANTHER:PTHR10516:SF293SUPFAM:SSF54534SignalP:SignalP-noTM
UniParc:UPI0000F1ADE5RefSeq:XP_015651405.1SEG:seg:::
Description
FK506 binding protein 15-1Similar to FK506-binding protein 2-1 precursor (EC 5.2.1.8) (Peptidyl-prolyl cis- trans isomerase) (PPIase) (Rotamase) (15 kDa FKBP) (FKBP-15-1). (Os09t0501850-01)
Coordinates
chr9:-:19415497..19417999
Molecular Weight (calculated)
16291.4 Da
IEP (calculated)
5.004
GRAVY (calculated)
-0.271
Length
154 amino acids
Sequence
(BLAST)
001: MAKPQLLLVV AAAALLLVVA ASAKKSGDVT ELQIGVKHKP ESCSIQAHKG DRVKVHYRGK LTDGTDFDSS YERGDPIEFE LGTGQVIKGW DQGILGMCVG
101: EKRKLKIPSK LGYGAQGSPP TIPGGATLIF DTELVAVNGE PASKSDEDDD DSEL
Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.