Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 9
- vacuole 5
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_09s0002g03770.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G25220.1 | VIT_09s0002g03770.t01 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P22790_001 | Banana | endoplasmic reticulum | 83.78 | 81.58 |
| Bra013225.1-P | Field mustard | endoplasmic reticulum | 81.76 | 78.57 |
| CDY52280 | Canola | endoplasmic reticulum | 81.76 | 78.57 |
| CDY67189 | Canola | endoplasmic reticulum | 81.76 | 78.57 |
| CDY15105 | Canola | endoplasmic reticulum | 81.76 | 78.06 |
| EER99137 | Sorghum | endoplasmic reticulum | 78.38 | 77.85 |
| Os09t0501850-01 | Rice | plasma membrane | 80.41 | 77.27 |
| AT3G25220.1 | Thale cress | endoplasmic reticulum | 79.73 | 77.12 |
| TraesCS5D01G286500.1 | Wheat | golgi | 77.7 | 75.66 |
| TraesCS5B01G278800.1 | Wheat | endoplasmic reticulum, golgi | 77.03 | 75.0 |
| KRH66149 | Soybean | endoplasmic reticulum | 74.32 | 74.83 |
| HORVU5Hr1G075490.3 | Barley | endoplasmic reticulum, extracellular, golgi | 77.7 | 74.68 |
| PGSC0003DMT400022512 | Potato | extracellular | 75.0 | 74.5 |
| TraesCS5A01G279500.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 76.35 | 74.34 |
| Zm00001d042372_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 77.03 | 73.55 |
| EES04100 | Sorghum | endoplasmic reticulum | 77.03 | 73.55 |
| Solyc09g057670.2.1 | Tomato | extracellular | 73.65 | 73.15 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 76.35 | 71.97 |
| TraesCS3D01G417400.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 75.0 | 71.15 |
| Zm00001d021021_P001 | Maize | endoplasmic reticulum | 77.7 | 70.55 |
| TraesCS3B01G457500.1 | Wheat | endoplasmic reticulum, golgi | 75.0 | 70.25 |
| KRH07427 | Soybean | endoplasmic reticulum | 72.97 | 70.13 |
| Os01t0915800-01 | Rice | plasma membrane | 74.32 | 69.62 |
| TraesCS3A01G421300.1 | Wheat | extracellular | 62.16 | 58.97 |
| TraesCS3A01G422000.2 | Wheat | endoplasmic reticulum, golgi, vacuole | 74.32 | 54.73 |
| Zm00001d012064_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 68.24 | 54.3 |
| VIT_07s0031g01150.t01 | Wine grape | plastid | 33.11 | 23.79 |
| VIT_01s0011g00930.t01 | Wine grape | plastid | 33.11 | 22.69 |
| VIT_05s0094g00100.t01 | Wine grape | plastid | 29.05 | 18.61 |
| VIT_16s0022g01760.t01 | Wine grape | nucleus | 41.22 | 11.62 |
| VIT_19s0093g00480.t01 | Wine grape | nucleus | 36.49 | 9.73 |
Protein Annotations
| EntrezGene:100245185 | wikigene:100245185 | MapMan:18.12.2 | Gene3D:3.10.50.40 | ProteinID:CBI40945 | ProteinID:CBI40945.3 |
| UniProt:D7UDY0 | EMBL:FN596771 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
| GO:GO:0019538 | GO:GO:0061077 | InterPro:IPR001179 | EntrezGene:LOC100245185 | wikigene:LOC100245185 | PFAM:PF00254 |
| InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 | SUPFAM:SSF54534 |
| SignalP:SignalP-noTM | TIGR:TC55306 | TIGR:TC59214 | UniParc:UPI00015CDF4B | ArrayExpress:VIT_00s0260g00060 | EnsemblPlantsGene:VIT_00s0260g00060 |
| EnsemblPlants:VIT_00s0260g00060.t01 | RefSeq:XP_002271056 | RefSeq:XP_002271056.1 | : | : | : |
Description
Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:D7UDY0]
Coordinates
chrUn:+:18545209..18559446
Molecular Weight (calculated)
15714.1 Da
IEP (calculated)
8.691
GRAVY (calculated)
-0.109
Length
148 amino acids
Sequence
(BLAST)
(BLAST)
001: MMKAAFVLLL LILTASVFAK KSGDVTDLQI GVKYKPESCD IQAHKGDKVK VHYRGKLTDG TVFDSSFERG DPIEFELGSG QVIKGWDQGL LGMCVGEKRK
101: LKIPAKLGYG AQGSPPKIPG GATLIFDTEL VAVNGKASSG AKADDSEL
101: LKIPAKLGYG AQGSPPKIPG GATLIFDTEL VAVNGKASSG AKADDSEL
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.