Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G457500.1 | Wheat | endoplasmic reticulum, golgi | 75.12 | 95.57 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 74.13 | 94.9 |
| TraesCS3D01G417400.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 73.63 | 94.87 |
| Zm00001d042372_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 69.15 | 89.68 |
| EES04100 | Sorghum | endoplasmic reticulum | 69.15 | 89.68 |
| Os01t0915800-01 | Rice | plasma membrane | 65.67 | 83.54 |
| VIT_00s0260g00060.t01 | Wine grape | endoplasmic reticulum | 54.73 | 74.32 |
| GSMUA_Achr7P22790_001 | Banana | endoplasmic reticulum | 55.72 | 73.68 |
| TraesCS3A01G421300.1 | Wheat | extracellular | 54.73 | 70.51 |
| TraesCS5A01G279500.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 53.23 | 70.39 |
| Zm00001d012064_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 64.18 | 69.35 |
| CDY05669 | Canola | endoplasmic reticulum, extracellular, golgi | 50.25 | 61.96 |
| CDY51059 | Canola | endoplasmic reticulum | 50.25 | 60.84 |
| AT5G48580.1 | Thale cress | endoplasmic reticulum, extracellular | 49.25 | 60.74 |
| CDX85349 | Canola | endoplasmic reticulum | 48.26 | 60.62 |
| CDX86294 | Canola | endoplasmic reticulum | 47.76 | 58.9 |
| Bra037476.1-P | Field mustard | endoplasmic reticulum | 47.76 | 58.9 |
| Bra020690.1-P | Field mustard | endoplasmic reticulum | 48.76 | 58.68 |
| TraesCS7A01G485300.1 | Wheat | plastid | 27.86 | 27.59 |
| TraesCS6A01G302500.1 | Wheat | plastid | 20.4 | 18.47 |
| TraesCS7A01G266500.2 | Wheat | plastid | 18.41 | 13.81 |
| TraesCS2A01G314800.2 | Wheat | nucleus | 28.86 | 12.29 |
| TraesCS5A01G158900.1 | Wheat | nucleus | 20.4 | 9.49 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G422000.2 | EnsemblPlantsGene:TraesCS3A01G422000 | Gene3D:3.10.50.40 | InterPro:IPR001179 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 | PFAM:PF00254 | PFscan:PS50059 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF54534 | MapMan:18.12.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3A:-:663292736..663297630
Molecular Weight (calculated)
21403.6 Da
IEP (calculated)
9.132
GRAVY (calculated)
-0.235
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTKKPQLLR LAVVAVAVAA VLLTGNNDEP QPNLHLIYRP VASPKDICSV FFSRFGFAHS VSRSGSPASA KKSADVTQLQ IGVKYKPESC TLQAHKGDKI
101: KVHYHGTLTD GSVFDSSYDR GDPFEFTLGN GQVIKGWDQG LLGMCVGEKR KLRIPAKMGY GERGSPPKIP GGATLVFDTE LIAVNGRTSA GAAAESDDSE
201: L
101: KVHYHGTLTD GSVFDSSYDR GDPFEFTLGN GQVIKGWDQG LLGMCVGEKR KLRIPAKMGY GERGSPPKIP GGATLVFDTE LIAVNGRTSA GAAAESDDSE
201: L
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.