Factsheet for TraesCS2A01G314800.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G333300.1	Wheat	nucleus	96.4	93.43
TraesCS2D01G313000.1	Wheat	nucleus	95.97	93.02
HORVU2Hr1G078350.3	Barley	nucleus	90.25	86.41
Os04t0446500-02	Rice	nucleus	69.7	62.67
EES10880	Sorghum	nucleus	63.77	60.2
Zm00001d025522_P001	Maize	plasma membrane	61.86	58.99
AT5G05420.1	Thale cress	cytosol	16.74	55.24
KRH77741	Soybean	nucleus	40.47	37.97
Zm00001d003535_P001	Maize	nucleus	11.23	37.86
Solyc03g007170.2.1	Tomato	nucleus	38.35	37.71
KRH27794	Soybean	nucleus	39.83	37.38
PGSC0003DMT400079626	Potato	nucleus	38.35	37.32
TraesCS5A01G279500.1	Wheat	endoplasmic reticulum, extracellular, golgi	11.65	36.18
VIT_16s0022g01760.t01	Wine grape	nucleus	38.77	34.86
TraesCS5A01G158900.1	Wheat	nucleus	30.93	33.8
GSMUA_Achr3P07930_001	Banana	nucleus	41.1	31.24
TraesCS3A01G421300.1	Wheat	extracellular	10.17	30.77
TraesCS3A01G422000.2	Wheat	endoplasmic reticulum, golgi, vacuole	12.29	28.86
TraesCS7A01G485300.1	Wheat	plastid	11.44	26.6
TraesCS6A01G302500.1	Wheat	plastid	10.17	21.62
TraesCS7A01G266500.2	Wheat	plastid	8.9	15.67

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	ncoils:Coil	InterPro:FK506_BP	GO:GO:0000412
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0018208	GO:GO:0019538	InterPro:IPR001179
PFAM:PF00254	PIRSF:PIRSF001473	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811
PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	EnsemblPlantsGene:TraesCS2A01G314800	EnsemblPlants:TraesCS2A01G314800.2	SEG:seg	:

Description

No Description!

Coordinates

chr2A:+:539964992..539967909

Molecular Weight (calculated)

51753.2 Da

IEP (calculated)

6.438

GRAVY (calculated)

-0.947

Length

472 amino acids

Sequence
(BLAST)

001: MSSFWGAEVK PEKPYTHTHS PRRGRLRLTQ ATLGAEVGKV EKGKTDLVQL QCTVKNKEPV YLCALIPGQS VTCHLDLEFE EKFVTFSVLG LRSVHLAGYY
101: VGDVYEDIGD SDTGSESLQG SDDDFMASDD DDVVIPVSHG QMNTDSEDDS DYDEDYDSED DEDLIYNQGR GKSSVVIEEI QDDEKPVDDN SRLQLAVRTP
201: PAESVESEDE DGFPVSESKK SSKGSSKKAK NLNNGTSTED RKRKSDAIND PHKSLGEVNA ENDVVSKKKK KDKKEVKLAS SADTVAAKQK KKKSKKQSTS
301: EGDTDKQADK RTITDNDEEP SKQGAKKKKN KKKTKENNGS ENQAATDVMN SASKEQTSPK ARTYGNGLIV QTVALGKPDG KKATPGKKVF VTYTGKLKNG
401: KIFDSNVGRK PFAFRLGIGQ VIKGWDIGVN GMRIGDKRKL TIPPSMGYGN QKAGEIPPNS TLLFDVELMN VH

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.