Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT3G25220.1 | Thale cress | endoplasmic reticulum | 28.67 | 26.8 |
| AT5G48580.1 | Thale cress | endoplasmic reticulum, extracellular | 30.07 | 26.38 |
| AT5G45680.1 | Thale cress | plastid | 36.36 | 25.0 |
| Zm00001d003535_P001 | Maize | nucleus | 23.78 | 24.29 |
| AT4G39710.1 | Thale cress | plastid | 31.47 | 20.74 |
| AT4G25340.1 | Thale cress | nucleus | 62.94 | 18.87 |
| AT2G43560.1 | Thale cress | plastid | 27.97 | 17.94 |
| PGSC0003DMT400079626 | Potato | nucleus | 59.44 | 17.53 |
| Solyc03g007170.2.1 | Tomato | nucleus | 58.74 | 17.5 |
| TraesCS2A01G314800.2 | Wheat | nucleus | 55.24 | 16.74 |
| HORVU2Hr1G078350.3 | Barley | nucleus | 56.64 | 16.43 |
| VIT_16s0022g01760.t01 | Wine grape | nucleus | 60.14 | 16.38 |
| TraesCS2B01G333300.1 | Wheat | nucleus | 55.24 | 16.22 |
| TraesCS2D01G313000.1 | Wheat | nucleus | 55.24 | 16.22 |
| KRH27794 | Soybean | nucleus | 56.64 | 16.1 |
| KRH77741 | Soybean | nucleus | 56.64 | 16.1 |
| Os04t0446500-02 | Rice | nucleus | 57.34 | 15.62 |
| EES10880 | Sorghum | nucleus | 53.15 | 15.2 |
| Zm00001d025522_P001 | Maize | plasma membrane | 52.45 | 15.15 |
| AT3G12340.1 | Thale cress | nucleus | 40.56 | 11.62 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:830425 | ProteinID:AED90872.1 | EMBL:AJ242484 | ArrayExpress:AT5G05420 |
| EnsemblPlantsGene:AT5G05420 | RefSeq:AT5G05420 | TAIR:AT5G05420 | RefSeq:AT5G05420-TAIR-G | EnsemblPlants:AT5G05420.1 | TAIR:AT5G05420.1 |
| Unigene:At.32997 | ProteinID:BAB09985.1 | EMBL:DQ487720 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR001179 | RefSeq:NP_196161.1 | PFAM:PF00254 |
| InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF9 | UniProt:Q9FLB3 |
| SUPFAM:SSF54534 | UniParc:UPI00000A59E3 | : | : | : | : |
Description
FKBP15-3Peptidyl-prolyl cis-trans isomerase FKBP15-3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLB3]
Coordinates
chr5:-:1604040..1604823
Molecular Weight (calculated)
15339.5 Da
IEP (calculated)
9.021
GRAVY (calculated)
-0.409
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSESAKKN EKISEEATVE SKAFSISVEK QTPDLDGLIV EELCMGNPNG KKAEPGKRVS VHYTGKLQGN GKIFDSTVGK SRYKFRLDAG KVIKGLDVGL
101: NGMLVGGKRK LTIPPEMGYG AEGAGSIPPD SWLVFDVELL NVK
101: NGMLVGGKRK LTIPPEMGYG AEGAGSIPPD SWLVFDVELL NVK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.