Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
26228564
|
msms PMID:
26228564
doi
Blaise Pascal University, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, Avenue des Landais, F-63 170 Aubière, France., CNRS, PAPPSO, UMR 0320/8120 Génétique Quantitative et Évolution - Le Moulon, F-91190 Gif-sur-Yvette, France., INRA, UMR1095 Genetics, Diversity and Ecophysiology of Cereals, 5 chemin de Beaulieu, F-63 039 Clermont-Ferrand, France.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G313000.1 | Wheat | nucleus | 98.77 | 98.77 |
| TraesCS2A01G314800.2 | Wheat | nucleus | 93.43 | 96.4 |
| HORVU2Hr1G078350.3 | Barley | nucleus | 91.99 | 90.87 |
| Os04t0446500-02 | Rice | nucleus | 68.99 | 64.0 |
| EES10880 | Sorghum | nucleus | 64.68 | 63.0 |
| Zm00001d025522_P001 | Maize | plasma membrane | 62.63 | 61.62 |
| AT5G05420.1 | Thale cress | cytosol | 16.22 | 55.24 |
| Zm00001d003535_P001 | Maize | nucleus | 11.09 | 38.57 |
| Solyc03g007170.2.1 | Tomato | nucleus | 37.99 | 38.54 |
| KRH77741 | Soybean | nucleus | 39.63 | 38.37 |
| PGSC0003DMT400079626 | Potato | nucleus | 37.99 | 38.14 |
| KRH27794 | Soybean | nucleus | 39.01 | 37.77 |
| TraesCS5B01G278800.1 | Wheat | endoplasmic reticulum, golgi | 11.29 | 36.18 |
| TraesCS3B01G457500.1 | Wheat | endoplasmic reticulum, golgi | 11.7 | 36.08 |
| VIT_16s0022g01760.t01 | Wine grape | nucleus | 38.4 | 35.62 |
| TraesCS5B01G156700.1 | Wheat | nucleus | 30.39 | 34.18 |
| GSMUA_Achr3P07930_001 | Banana | nucleus | 40.45 | 31.72 |
| TraesCS7B01G388800.1 | Wheat | plastid | 11.29 | 27.09 |
| TraesCS6B01G331700.1 | Wheat | plastid | 9.86 | 21.72 |
| TraesCS7B01G166000.2 | Wheat | plastid | 8.83 | 16.23 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:2.60.120.340 | Gene3D:3.10.50.40 | InterPro:FK506_BP | GO:GO:0000412 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0018208 | GO:GO:0019538 | InterPro:IPR001179 | PFAM:PF00254 |
| PIRSF:PIRSF001473 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF9 |
| SUPFAM:SSF54534 | EnsemblPlantsGene:TraesCS2B01G333300 | EnsemblPlants:TraesCS2B01G333300.1 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2B:+:476557425..476560944
Molecular Weight (calculated)
53466.9 Da
IEP (calculated)
5.515
GRAVY (calculated)
-1.001
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFWGAEVK PEKPYTHTHS PRRGRLRLTQ ATLGAEVGKV EKGKTNLVQL QCTVKNKEPV YLCALIPGQS VTCHLDLEFE EKFVTFSVLG SRSVHLAGYY
101: IGDVYEDIGD SDTGSESLQG SDDDFLASDD DDVVIPVSHG QMNTDSEDDS DYDEDYDSED DEDLMYNQGR GKSSVVIEEI QEDEKPVDDN SRLQLAVRTL
201: PAESVESEDE DGFPVSESKK SSKGSSKKDK NLNNGTSTED RKRKSDAIND PHKSSGEVNA ENDVVSKKKK KAKDKRNAVD SEKVNDEEKE VKLASSADTV
301: AAKQKKKKSK KQSASEGDTD EQADKKTITD NDEEPSKQGA KKKKNKKKTK ENNGSENQAQ TDVMNSASKE QTSPKARTYG NGLIVQTVAL GKPDGKKATP
401: GKKVFVTYTG KLKNGKIFDS NVGRKPFSFR LGVGQVIKGW DIGVNGMRIG DKRKLTIPPS MGYGNQKAGE IPPNSTLLFD VELMNVQ
101: IGDVYEDIGD SDTGSESLQG SDDDFLASDD DDVVIPVSHG QMNTDSEDDS DYDEDYDSED DEDLMYNQGR GKSSVVIEEI QEDEKPVDDN SRLQLAVRTL
201: PAESVESEDE DGFPVSESKK SSKGSSKKDK NLNNGTSTED RKRKSDAIND PHKSSGEVNA ENDVVSKKKK KAKDKRNAVD SEKVNDEEKE VKLASSADTV
301: AAKQKKKKSK KQSASEGDTD EQADKKTITD NDEEPSKQGA KKKKNKKKTK ENNGSENQAQ TDVMNSASKE QTSPKARTYG NGLIVQTVAL GKPDGKKATP
401: GKKVFVTYTG KLKNGKIFDS NVGRKPFSFR LGVGQVIKGW DIGVNGMRIG DKRKLTIPPS MGYGNQKAGE IPPNSTLLFD VELMNVQ
001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ
Arabidopsis Description
FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.