Factsheet for Zm00001d003535_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G05420.1	Thale cress	cytosol	24.29	23.78
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	16.43	14.84
Zm00001d021021_P001	Maize	endoplasmic reticulum	16.43	14.11
EES10880	Sorghum	nucleus	47.86	13.4
Zm00001d025522_P001	Maize	plasma membrane	45.71	12.93
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	17.14	12.9
Zm00001d046940_P001	Maize	plastid	17.86	11.74
KRH77741	Soybean	nucleus	42.14	11.73
Solyc03g007170.2.1	Tomato	nucleus	40.0	11.67
KRH27794	Soybean	nucleus	41.43	11.53
PGSC0003DMT400079626	Potato	nucleus	39.29	11.34
TraesCS2A01G314800.2	Wheat	nucleus	37.86	11.23
TraesCS2B01G333300.1	Wheat	nucleus	38.57	11.09
TraesCS2D01G313000.1	Wheat	nucleus	38.57	11.09
Os04t0446500-02	Rice	nucleus	40.0	10.67
HORVU2Hr1G078350.3	Barley	nucleus	37.14	10.55
Zm00001d018077_P002	Maize	plastid	16.43	10.18
VIT_16s0022g01760.t01	Wine grape	nucleus	36.43	9.71
Zm00001d031696_P002	Maize	plastid	15.71	9.4
Zm00001d019987_P001	Maize	cytosol	29.29	9.23
GSMUA_Achr3P07930_001	Banana	nucleus	35.71	8.05
Zm00001d005534_P001	Maize	nucleus	19.29	7.24

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A1D6E9Q1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	InterPro:IPR001179	ProteinID:ONM17123.1	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI0008458AF5	EnsemblPlantsGene:Zm00001d003535
EnsemblPlants:Zm00001d003535_P001	EnsemblPlants:Zm00001d003535_T001	:	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase FKBP53

Coordinates

chr2:-:47128982..47129749

Molecular Weight (calculated)

15969.1 Da

IEP (calculated)

10.302

GRAVY (calculated)

-0.870

Length

140 amino acids

Sequence
(BLAST)

001: MWELCQTPPK DDAIPFDNVL HQNSLIKTMR RQVHMTLVKR TRKRRAHDIN RSENQATTGL GESDNKEPLQ TRTFANGMIT QEVEMGKPDG KKATHGKKVS
101: VKYIGKLKDD NIFYSNVSGR HFESRLGVGQ VSGWDVGHMY

Best Arabidopsis Sequence Match ( AT4G25340.2 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNVFEFHR HARW

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.