Factsheet for PGSC0003DMT400079626

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus, vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g007170.2.1	Tomato	nucleus	94.43	95.42
AT5G05420.1	Thale cress	cytosol	17.53	59.44
VIT_16s0022g01760.t01	Wine grape	nucleus	47.84	44.19
KRH77741	Soybean	nucleus	45.77	44.14
KRH27794	Soybean	nucleus	44.33	42.74
Zm00001d003535_P001	Maize	nucleus	11.34	39.29
TraesCS2A01G314800.2	Wheat	nucleus	37.32	38.35
HORVU2Hr1G078350.3	Barley	nucleus	38.76	38.13
TraesCS2D01G313000.1	Wheat	nucleus	38.14	37.99
TraesCS2B01G333300.1	Wheat	nucleus	38.14	37.99
EES10880	Sorghum	nucleus	38.56	37.4
Zm00001d025522_P001	Maize	plasma membrane	37.94	37.17
Os04t0446500-02	Rice	nucleus	39.59	36.57
GSMUA_Achr3P07930_001	Banana	nucleus	44.95	35.1
PGSC0003DMT400033263	Potato	nucleus	38.35	33.7
PGSC0003DMT400022512	Potato	extracellular	10.31	33.56
PGSC0003DMT400067618	Potato	cytosol, plastid	12.16	26.11
PGSC0003DMT400056671	Potato	plastid	10.72	24.88
PGSC0003DMT400038848	Potato	plastid	9.9	20.43
PGSC0003DMT400037664	Potato	mitochondrion	10.72	18.57

Protein Annotations

EntrezGene:102579636	MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	ncoils:Coil	InterPro:FK506_BP
GO:GO:0000412	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005528
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016853	GO:GO:0018208
GO:GO:0019538	InterPro:IPR001179	UniProt:M1D260	InterPro:Nucleoplasmin_core_dom_sf	PFAM:PF00254	EnsemblPlantsGene:PGSC0003DMG400031007
PGSC:PGSC0003DMG400031007	EnsemblPlants:PGSC0003DMT400079626	PIRSF:PIRSF001473	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	SUPFAM:SSF69203	UniParc:UPI0002954510	RefSeq:XP_006348066.1
SEG:seg	:	:	:	:	:

Description

FK506-binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400031007]

Coordinates

chr3:+:40802610..40807151

Molecular Weight (calculated)

53615.8 Da

IEP (calculated)

5.000

GRAVY (calculated)

-1.158

Length

485 amino acids

Sequence
(BLAST)

001: MAFWGVELKS GKPFTHNFEK ERGRLHISQA TLGSGSSNKK SIVQCKVGDK EPIYVCSLLP EKLETCPLNL EFEEDEDVTF SVIGSHNVHL SGFFYGESED
101: CCGDEHGSDY EEGASETDSA SDDSFEFNYD TEDEDEDGST DNDDFIMYPP SPIPNSGVRI EEILEDEKPT DENGTSKKPK KKKNQSKGID DSERQIVVKG
201: NTDSPQMESE DEDGFPISAP SENKTKSVRS QKSDGTKDQD TGEEAGEKKG LKKRLRDDTG KANDQQREDN AKQNKKNKKK KVVDGEESVR EDVLKSSANP
301: EHVEGNDEAV SVGKTEDGQK PTNEKDTEKK KKKKKNKKNQ QDGEAVTEVE KDKKNESHEV QEENAGTKPS HARTFGNGLV IEELAMGKPD GKKASPGKKV
401: GVRYTGKLKK NGKIFDSNIG KRPFEFRLGI GQVIKGWDVG VNGMRVGDKR RITIPPAMGY GAKGAGRDIP PNSWLVFDVE LVNVN

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.