Factsheet for HORVU2Hr1G078350.3

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
plastid 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G333300.1	Wheat	nucleus	90.87	91.99
TraesCS2D01G313000.1	Wheat	nucleus	90.67	91.79
TraesCS2A01G314800.2	Wheat	nucleus	86.41	90.25
EES10880	Sorghum	nucleus	64.91	64.0
Os04t0446500-02	Rice	nucleus	67.14	63.05
Zm00001d025522_P001	Maize	plasma membrane	62.47	62.22
AT5G05420.1	Thale cress	cytosol	16.43	56.64
Solyc03g007170.2.1	Tomato	nucleus	38.13	39.17
PGSC0003DMT400079626	Potato	nucleus	38.13	38.76
KRH77741	Soybean	nucleus	37.93	37.18
Zm00001d003535_P001	Maize	nucleus	10.55	37.14
KRH27794	Soybean	nucleus	37.53	36.78
HORVU3Hr1G093290.1	Barley	endoplasmic reticulum	11.56	36.31
VIT_16s0022g01760.t01	Wine grape	nucleus	38.54	36.19
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	11.16	35.71
GSMUA_Achr3P07930_001	Banana	nucleus	39.96	31.72
HORVU5Hr1G049560.12	Barley	nucleus	29.01	30.95
HORVU7Hr1G109380.4	Barley	plastid	11.36	25.93
HORVU6Hr1G023790.2	Barley	cytosol, nucleus	11.76	21.25
HORVU6Hr1G075080.2	Barley	plastid	9.74	20.34
HORVU7Hr1G056240.7	Barley	endoplasmic reticulum, extracellular, mitochondrion	9.13	13.93

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	EMBL:AK359200	ncoils:Coil	UniProt:F2D5P0
InterPro:FK506_BP	GO:GO:0000412	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016853
GO:GO:0018208	GO:GO:0019538	EnsemblPlantsGene:HORVU2Hr1G078350	EnsemblPlants:HORVU2Hr1G078350.3	InterPro:IPR001179	PFAM:PF00254
PIRSF:PIRSF001473	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF9
SUPFAM:SSF54534	UniParc:UPI000200569C	SEG:seg	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:F2D5P0]

Coordinates

chrchr2H:+:567400862..567404412

Molecular Weight (calculated)

54229.9 Da

IEP (calculated)

5.544

GRAVY (calculated)

-1.060

Length

493 amino acids

Sequence
(BLAST)

001: MSSFWGAEVK PEKPYTHTHS PRRGRLRLTQ ATLGAEVGKA EKGKTNLVQL QCTVKNKEPV YLCALIPGQS VTCHLDLEFE EKFVTFSVIG PRSVHLAGYY
101: VGDVYEDTGD SDTGSDSLQG SDDDFMASDE EDVVIPISHG QMNTDSEDDL EYDDEYDSED DEDLMYNQGR GKSSVVIEEI QEDEKPVGGE GQMGSKKKQN
201: RENDDNSRLQ LAVRTPPVES VESEDEDGFP VSESKKSSKG SSKKEDRKRK SDAINDPSKS SGEVNAENDV VSKKKKKAKD KRNAVDSEKV NDEDKEMKLA
301: SSADTGAAKQ KKKKSKKQSA SEGDTDEQAD KKTITDNDEE PSKEGAKKKK NKKKTQENNR SENQAQADVM NSASKEQTSP KARTYGNGLI VQTVALGKPD
401: GKKATPGRKV FVTYTGKLKN GKIFDSNVGR KPFQFRLGVG EVIKGWDIGV NGMRVGDKRK LTIPPSMGYG NQKAGTIPPN STLLFDVELM NVQ

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.