Factsheet for HORVU7Hr1G056240.7

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, endoplasmic reticulum, extracellular

Predictor Summary:

mitochondrion 2
extracellular 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, mitochondrion
Any Predictor:	endoplasmic reticulum, extracellular, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	extracellular
TargetP:	mitochondrion
YLoc:	endoplasmic reticulum

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G075560.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G43560.1	HORVU1Hr1G075560.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G166000.2	Wheat	plastid	73.68	89.81
TraesCS7A01G266500.2	Wheat	plastid	73.68	88.81
TraesCS7D01G268300.1	Wheat	plastid	52.94	72.77
Zm00001d031696_P002	Maize	plastid	48.92	67.52
EES15264	Sorghum	plastid	49.54	66.12
Os08t0541400-01	Rice	plastid	44.58	55.17
Bra037701.1-P	Field mustard	plastid	35.29	52.78
CDY30419	Canola	plastid	35.29	52.78
CDY23379	Canola	plastid	34.98	52.31
KRH24569	Soybean	plastid	37.15	51.72
AT2G43560.1	Thale cress	plastid	35.29	51.12
Solyc04g015040.2.1	Tomato	plastid	37.15	51.06
KRH29576	Soybean	plastid	36.53	50.86
VIT_05s0094g00100.t01	Wine grape	plastid	36.22	50.65
GSMUA_Achr7P23820_001	Banana	plastid	36.53	50.0
PGSC0003DMT400038848	Potato	plastid	36.22	49.79
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	12.07	25.32
HORVU7Hr1G109380.4	Barley	plastid	15.48	23.15
HORVU3Hr1G093290.1	Barley	endoplasmic reticulum	11.15	22.93
HORVU6Hr1G075080.2	Barley	plastid	13.93	19.07
HORVU2Hr1G078350.3	Barley	nucleus	13.93	9.13
HORVU5Hr1G049560.12	Barley	nucleus	12.69	8.87
HORVU6Hr1G023790.2	Barley	cytosol, nucleus	5.88	6.96

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A287WL98	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005575	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU7Hr1G056240	EnsemblPlants:HORVU7Hr1G056240.7
InterPro:IPR001179	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811
PANTHER:PTHR43811:SF17	SUPFAM:SSF54534	TMHMM:TMhelix	UniParc:UPI000B468F55	SEG:seg	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287WL98]

Coordinates

chrchr7H:-:233961299..233963269

Molecular Weight (calculated)

33798.0 Da

IEP (calculated)

9.063

GRAVY (calculated)

0.137

Length

323 amino acids

Sequence
(BLAST)

001: VASHGRRAPC VVLHARRRSE WWRLDGFNLL YPLSLVGSSV VLSPAVFLLP PPPLPLPNPM AAAASSSASP ILLPSGPRGA SSRAWFPSGG GRAFVRGGNS
101: WAPCCCRAAA GGSLPQCGGA DDNGGGVVTR RGVVGAVALG VSSSAFCLQA ALDAVAGGLP PEEKPKLCDA ACEAELENLP MVTTESGLQY KDIKVGRGPS
201: PPIGFQVAAN CIAMVPNGQI FDSSLEKGQP YIFRVGAGQV IKGLDEGILS MKVGGLRRLY IPGQVSSLAL LSLRKQCRKQ NKTKLALVQE NFTFSSTDHA
301: PCFFSPGYLD RIVIIFNLVD LSS

Best Arabidopsis Sequence Match ( AT2G43560.1 )
(BLAST)

001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE

Arabidopsis Description

FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.