CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH24569	Soybean	plastid	96.98	96.98
CDY23379	Canola	plastid	66.38	71.3
VIT_05s0094g00100.t01	Wine grape	plastid	70.69	71.0
Bra037701.1-P	Field mustard	plastid	65.52	70.37
CDY30419	Canola	plastid	65.52	70.37
AT2G43560.1	Thale cress	plastid	67.24	69.96
Zm00001d031696_P002	Maize	plastid	64.22	63.68
Solyc04g015040.2.1	Tomato	plastid	64.22	63.4
PGSC0003DMT400038848	Potato	plastid	63.36	62.55
EES15264	Sorghum	plastid	64.66	61.98
GSMUA_Achr7P23820_001	Banana	plastid	62.5	61.44
TraesCS7D01G268300.1	Wheat	plastid	59.91	59.15
Os08t0541400-01	Rice	plastid	64.66	57.47
TraesCS7B01G166000.2	Wheat	plastid	50.43	44.15
TraesCS7A01G266500.2	Wheat	plastid	50.86	44.03
HORVU7Hr1G056240.7	Barley	endoplasmic reticulum, extracellular, mitochondrion	50.86	36.53
KRH66149	Soybean	endoplasmic reticulum	17.67	27.89
KRH42434	Soybean	plastid	25.43	27.31
KRH07427	Soybean	endoplasmic reticulum	17.67	26.62
KRH43236	Soybean	nucleus	21.55	23.92
KRH59400	Soybean	extracellular, vacuole	14.66	21.52
KRH77741	Soybean	nucleus	22.84	10.54
KRH27794	Soybean	nucleus	22.41	10.34
KRG89916	Soybean	nucleus	21.55	8.32

Protein Annotations

EntrezGene:100818743	MapMan:18.12.2	Gene3D:3.10.50.40	EMBL:ACUP02006806	EnsemblPlantsGene:GLYMA_11G124900	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	UniProt:I1LJL8	InterPro:IPR001179	EnsemblPlants:KRH29576
ProteinID:KRH29576	ProteinID:KRH29576.1	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR43811	PANTHER:PTHR43811:SF17	SUPFAM:SSF54534	SignalP:SignalP-noTM	UniParc:UPI000233CFBF	:

Description

hypothetical protein

Coordinates

chr11:+:9486912..9490819

Molecular Weight (calculated)

24606.8 Da

IEP (calculated)

6.600

GRAVY (calculated)

-0.026

Length

232 amino acids

Sequence
(BLAST)

001: MTSLVMPTMA SSLLLQLGST CGKSPSFAPP QSILVDKLRR LVIKVKSSET RECTTAMFNA NSRRDFLGLA LGVSGLFIGS LDANGAGLPP EEKPKLCDDT
101: CEKELENVPT VTTGSGLQYK DIKVGQGPSP PIGFQVAANY VAMVPSGQIF DSSLEKGQPY IFRVGSGQVI QGLDEGILSM KVGGKRRLYI PGSLAFPKGL
201: TSAPGRPRVA PSSPVIFDVS LEYIPGLEVD EE

Best Arabidopsis Sequence Match ( AT2G43560.1 )
(BLAST)

001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE

Arabidopsis Description

FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.