Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
- endoplasmic reticulum 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
plastid:
20363867
plastid: 22908117 extracellular: 29876421 |
msms PMID:
22908117
doi
Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.
msms PMID:
20363867
doi
Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.
msms PMID:
29876421
doi
Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
PGSC0003DMT400038848 | Potato | plastid | 95.32 | 95.32 |
Bra037701.1-P | Field mustard | plastid | 62.98 | 68.52 |
CDY23379 | Canola | plastid | 62.98 | 68.52 |
CDY30419 | Canola | plastid | 62.98 | 68.52 |
AT2G43560.1 | Thale cress | plastid | 64.26 | 67.71 |
KRH24569 | Soybean | plastid | 63.83 | 64.66 |
VIT_05s0094g00100.t01 | Wine grape | plastid | 63.4 | 64.5 |
KRH29576 | Soybean | plastid | 63.4 | 64.22 |
Zm00001d031696_P002 | Maize | plastid | 60.0 | 60.26 |
TraesCS7D01G268300.1 | Wheat | plastid | 57.87 | 57.87 |
GSMUA_Achr7P23820_001 | Banana | plastid | 57.45 | 57.2 |
EES15264 | Sorghum | plastid | 58.72 | 57.02 |
Os08t0541400-01 | Rice | plastid | 59.57 | 53.64 |
TraesCS7B01G166000.2 | Wheat | plastid | 50.64 | 44.91 |
TraesCS7A01G266500.2 | Wheat | plastid | 51.06 | 44.78 |
HORVU7Hr1G056240.7 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 51.06 | 37.15 |
Solyc09g057670.2.1 | Tomato | extracellular | 18.3 | 28.86 |
Solyc04g054520.2.1 | Tomato | nucleus | 22.13 | 24.88 |
Solyc08g006540.2.1 | Tomato | plastid | 24.26 | 21.67 |
Solyc03g007170.2.1 | Tomato | nucleus | 20.43 | 10.0 |
Solyc01g091340.2.1 | Tomato | nucleus | 20.0 | 8.53 |
Solyc02g005290.2.1 | Tomato | nucleus | 16.6 | 7.53 |
Protein Annotations
MapMan:18.12.2 | Gene3D:3.10.50.40 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
InterPro:IPR001179 | UniProt:K4BQ07 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 |
PANTHER:PTHR43811 | PANTHER:PTHR43811:SF17 | SUPFAM:SSF54534 | EnsemblPlantsGene:Solyc04g015040.2 | EnsemblPlants:Solyc04g015040.2.1 | UniParc:UPI00027667F9 |
Description
Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4BQ07]
Coordinates
chr4:-:5242436..5247624
Molecular Weight (calculated)
25551.9 Da
IEP (calculated)
7.292
GRAVY (calculated)
-0.119
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: MASTSLVLPL SSAFSINLFK NHHQRIRKLQ TGNGVTREFG LRLWAQENLM GTVEEAERYN TTKRRDLVMG LGFCGVTSFL VGSCYAEAAG LPPEEKPKLC
101: DATCEKELEN VPMVTTESGL QYKDIKVGRG PSPPVGFQVA ANYVAMVPSG QIFDSSLEKG RPYIFRVGAD QVIKGLDEGI LSMKVGGLRR LYVPGSLAFP
201: KGLISAPGRP RVAPNSPLVF DVSLEFIPGL ESDEE
101: DATCEKELEN VPMVTTESGL QYKDIKVGRG PSPPVGFQVA ANYVAMVPSG QIFDSSLEKG RPYIFRVGAD QVIKGLDEGI LSMKVGGLRR LYVPGSLAFP
201: KGLISAPGRP RVAPNSPLVF DVSLEFIPGL ESDEE
001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
Arabidopsis Description
FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.