Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 2
- vacuole 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400033263 | Potato | nucleus | 95.28 | 95.11 |
| VIT_19s0093g00480.t01 | Wine grape | nucleus | 43.19 | 42.88 |
| Solyc03g007170.2.1 | Tomato | nucleus | 33.76 | 38.75 |
| Os09t0293900-01 | Rice | nucleus | 27.77 | 36.08 |
| KXG35300 | Sorghum | nucleus | 28.68 | 35.43 |
| TraesCS5D01G164000.1 | Wheat | nucleus | 27.4 | 34.87 |
| TraesCS5B01G156700.1 | Wheat | nucleus | 27.4 | 34.87 |
| TraesCS5A01G158900.1 | Wheat | nucleus | 27.22 | 34.72 |
| Zm00001d019987_P001 | Maize | cytosol | 27.95 | 34.68 |
| GSMUA_Achr3P07930_001 | Banana | nucleus | 37.57 | 33.33 |
| Zm00001d005534_P001 | Maize | nucleus | 22.14 | 32.71 |
| HORVU5Hr1G049560.12 | Barley | nucleus | 25.95 | 30.95 |
| Solyc09g057670.2.1 | Tomato | extracellular | 8.35 | 30.87 |
| Solyc04g054520.2.1 | Tomato | nucleus | 9.44 | 24.88 |
| Os09t0103800-00 | Rice | cytosol | 20.87 | 22.12 |
| Solyc08g006540.2.1 | Tomato | plastid | 10.53 | 22.05 |
| Solyc04g015040.2.1 | Tomato | plastid | 8.53 | 20.0 |
| Solyc02g005290.2.1 | Tomato | nucleus | 17.79 | 18.92 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:2.60.120.340 | Gene3D:3.10.50.40 | ncoils:Coil | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR001179 | UniProt:K4AZ74 | PFAM:PF00254 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF7 | SUPFAM:SSF54534 | EnsemblPlantsGene:Solyc01g091340.2 |
| EnsemblPlants:Solyc01g091340.2.1 | UniParc:UPI00027681DE | SEG:seg | : | : | : |
Description
Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4AZ74]
Coordinates
chr1:+:84983437..84991329
Molecular Weight (calculated)
60652.7 Da
IEP (calculated)
5.230
GRAVY (calculated)
-0.869
Length
551 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFWGIEVKA GKPVTHLSNN ERGRLRISQA TLGIGNAETK SLVQCNVGNK SPVFLCALLP NKTESCHLDL EFEEAEDVVF SVLGPRTVYL TGYYVGNSRR
101: ANVNSDTESY GEDIADTETG ESCHDSDDDK YDDSFINDAE PEISPPSPAS SSGVQEDDEN VSDNKLINNK GGHKRLRKKY QVSESENEDI LQESDDEDSC
201: LLSALKKKTD VKVVVASEDA QKNDIPHRTE NGGAVESKKA KHENSINSKK KRKQPDGNGG KLLEANTISD RKDNREDKTN LVDVGFAMTI DMKDGQSDSL
301: EPLAEEDSNH VPKSKKRKHS VEAKSVENHD TDCAVILKED QLKQDPLKAG HLGEDPIAID EEDQKLTINN SSKDGKSDSV ADEHQPDKKL KKKKKKKTKS
401: QDDCLVNKDL PVLQENEMNR QPVDVEDKSL KVKSTVIRTL SNGLTIEELA VGEPGGKLAA PGKKIKVHYT GKLKENGQIF YTNMGKSPYK FRLGDKDVIE
501: GWNLGLAGMR VGDKRRLTVP PSIGYGSEGA GENIPPNSWL VFDIELIGVR G
101: ANVNSDTESY GEDIADTETG ESCHDSDDDK YDDSFINDAE PEISPPSPAS SSGVQEDDEN VSDNKLINNK GGHKRLRKKY QVSESENEDI LQESDDEDSC
201: LLSALKKKTD VKVVVASEDA QKNDIPHRTE NGGAVESKKA KHENSINSKK KRKQPDGNGG KLLEANTISD RKDNREDKTN LVDVGFAMTI DMKDGQSDSL
301: EPLAEEDSNH VPKSKKRKHS VEAKSVENHD TDCAVILKED QLKQDPLKAG HLGEDPIAID EEDQKLTINN SSKDGKSDSV ADEHQPDKKL KKKKKKKTKS
401: QDDCLVNKDL PVLQENEMNR QPVDVEDKSL KVKSTVIRTL SNGLTIEELA VGEPGGKLAA PGKKIKVHYT GKLKENGQIF YTNMGKSPYK FRLGDKDVIE
501: GWNLGLAGMR VGDKRRLTVP PSIGYGSEGA GENIPPNSWL VFDIELIGVR G
001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ
Arabidopsis Description
FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.