Factsheet for Solyc02g005290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
vacuole 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400037664	Potato	mitochondrion	43.24	80.0
Solyc09g057670.2.1	Tomato	extracellular	7.53	26.17
Solyc04g054520.2.1	Tomato	nucleus	9.27	22.97
TraesCS5A01G158900.1	Wheat	nucleus	18.15	21.76
TraesCS5D01G164000.1	Wheat	nucleus	18.15	21.71
TraesCS5B01G156700.1	Wheat	nucleus	17.76	21.25
Bra025447.1-P	Field mustard	plastid	18.34	20.47
CDY27659	Canola	plastid	18.15	20.13
Zm00001d019987_P001	Maize	cytosol	16.8	19.59
Solyc03g007170.2.1	Tomato	nucleus	17.76	19.17
Os09t0293900-01	Rice	nucleus	15.64	19.1
VIT_19s0093g00480.t01	Wine grape	nucleus	20.27	18.92
CDX99700	Canola	endoplasmic reticulum, vacuole	17.95	18.71
Solyc08g006540.2.1	Tomato	plastid	9.46	18.63
KXG35300	Sorghum	nucleus	16.02	18.61
AT3G12340.1	Thale cress	nucleus	17.76	18.44
HORVU5Hr1G049560.12	Barley	nucleus	16.02	17.97
Solyc01g091340.2.1	Tomato	nucleus	18.92	17.79
Zm00001d005534_P001	Maize	nucleus	12.74	17.69
GSMUA_Achr3P07930_001	Banana	nucleus	20.66	17.23
KRG89916	Soybean	nucleus	19.5	16.81
Solyc04g015040.2.1	Tomato	plastid	7.53	16.6
Os09t0103800-00	Rice	cytosol	15.64	15.58
CDY61640	Canola	nucleus	10.04	14.05

Protein Annotations

MapMan:15.5.28	MapMan:18.12.2	Gene3D:3.10.50.40	InterPro:GEBP	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006139	GO:GO:0006355	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179
UniProt:K4B4D1	PFAM:PF00254	PFAM:PF04504	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	EnsemblPlantsGene:Solyc02g005290.2	EnsemblPlants:Solyc02g005290.2.1	UniParc:UPI0002767E8A
SEG:seg	:	:	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4B4D1]

Coordinates

chr2:-:7633701..7645348

Molecular Weight (calculated)

57648.8 Da

IEP (calculated)

10.005

GRAVY (calculated)

-0.491

Length

518 amino acids

Sequence
(BLAST)

001: MENGVLQQGS IILTNSIVDS EIMQRRGKLM PRGGGGGSEK MIKKKSEKVG AWSKEDEITI LKGLIKLKTE KGKIRFDYVQ LYDSIKQSLA HKSATPLHLQ
101: KKIKCLREKY KNNFNKSTRT WSIPHEEELF YLSDKIWGKD DHQQLKIPSS SLMNQQQLTI PSSSLMNQQH LTLPSSSLMN QQQLTLPSSS LMNQQQLTLP
201: SSSLMNQQFT ISDTTFVGDL GLALTTMSRN QSNQMQVALQ QFKLVSQSLS IRKSYANQIL HAHITLKEEG LSEQKIARSY FDTKIQHAQL VSDAYNASHG
301: FGGSLVNIVS DCVLKEDATK VMNEGSCPPA TIGCRKPING KPSGTSLKSV REMCHSQERK KKKKRKIENP EKHRDSSIQS QLEMENQSAV AYAKINYESA
401: KSSDIHTLSD GLTVEVMVKG KADGKVASLG KQIKIHFIAK LRDTGCIVGS TIGAAPHQFC LGYEKVLKGL NIGIEGMHVG EKRRLTIPPS LGPGRKAKPP
501: IMPDSWLLYE VELVDICE

Best Arabidopsis Sequence Match ( AT3G12340.2 )
(BLAST)

001: MEKGSSDDYD YSDSFINDDD PAVRGSHVSS TDDDEISIKE MTAKTKEKKK NGKGRRLRKK FQVSDSDSDE TSARADESSN EDSVEVLNNG NEPKIAKVHS
101: SESPLPSRVT RSKARKSTLE SGEPAKCEKT FEAKINTHKT LDNREDKPLD DAKLSPVQKD CEILSKKKRN KERSKSSAII IDSDDGEGKN MPESLQNENP
201: VSDKGIKSSS DVLLSQNGDA TLSKKKKKRD RREETTDVPE CPEKKKQAID KNIEKEAGTK KPLETRTLSN GVIIEDIEKG KLDGKSAVKG KKVSILYTGK
301: LKDTGNLFDS NLGEDPLRFR LGGENVIEGL SIGVEGMRVG DKRRLIIPPA LGYSKRGLKE KVPKSAWLVY EVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.