Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27659 | Canola | plastid | 65.33 | 69.81 |
| Bra025447.1-P | Field mustard | plastid | 64.13 | 68.97 |
| CDX99700 | Canola | endoplasmic reticulum, vacuole | 65.13 | 65.39 |
| CDY61640 | Canola | nucleus | 46.29 | 62.43 |
| AT5G05420.1 | Thale cress | cytosol | 11.62 | 40.56 |
| VIT_19s0093g00480.t01 | Wine grape | nucleus | 39.08 | 35.14 |
| Os09t0293900-01 | Rice | nucleus | 28.66 | 33.73 |
| TraesCS5A01G158900.1 | Wheat | nucleus | 28.86 | 33.33 |
| TraesCS5D01G164000.1 | Wheat | nucleus | 28.66 | 33.03 |
| TraesCS5B01G156700.1 | Wheat | nucleus | 28.26 | 32.56 |
| Zm00001d019987_P001 | Maize | cytosol | 27.66 | 31.08 |
| KRG89916 | Soybean | nucleus | 37.27 | 30.95 |
| KXG35300 | Sorghum | nucleus | 27.66 | 30.94 |
| AT4G25340.1 | Thale cress | nucleus | 28.26 | 29.56 |
| Zm00001d005534_P001 | Maize | nucleus | 21.84 | 29.22 |
| HORVU5Hr1G049560.12 | Barley | nucleus | 27.05 | 29.22 |
| AT3G25220.1 | Thale cress | endoplasmic reticulum | 8.22 | 26.8 |
| AT4G39710.1 | Thale cress | plastid | 11.22 | 25.81 |
| AT5G45680.1 | Thale cress | plastid | 10.62 | 25.48 |
| AT5G48580.1 | Thale cress | endoplasmic reticulum, extracellular | 8.22 | 25.15 |
| Os09t0103800-00 | Rice | cytosol | 22.65 | 21.73 |
| AT2G43560.1 | Thale cress | plastid | 9.22 | 20.63 |
| Solyc02g005290.2.1 | Tomato | nucleus | 18.44 | 17.76 |
| PGSC0003DMT400037664 | Potato | mitochondrion | 8.42 | 15.0 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:2.60.120.340 | Gene3D:3.10.50.40 | EntrezGene:820412 | ProteinID:AAG51009.1 | ProteinID:AAG51068.1 |
| ProteinID:AEE75184.1 | ArrayExpress:AT3G12340 | EnsemblPlantsGene:AT3G12340 | RefSeq:AT3G12340 | TAIR:AT3G12340 | RefSeq:AT3G12340-TAIR-G |
| EnsemblPlants:AT3G12340.1 | TAIR:AT3G12340.1 | ProteinID:BAB03141.1 | EMBL:DQ487560 | UniProt:F4J9Q6 | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR001179 | RefSeq:NP_001326743.1 | RefSeq:NP_001326744.1 |
| RefSeq:NP_187840.7 | PFAM:PF00254 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50059 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF9 | SUPFAM:SSF54534 | UniParc:UPI0001A7B058 | SEG:seg |
Description
FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
Coordinates
chr3:-:3925498..3929473
Molecular Weight (calculated)
55180.8 Da
IEP (calculated)
7.465
GRAVY (calculated)
-0.870
Length
499 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.