Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 6
- golgi 5
- endoplasmic reticulum 7
- plasma membrane 4
- vacuole 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67189 | Canola | endoplasmic reticulum | 88.24 | 87.66 |
| Bra013225.1-P | Field mustard | endoplasmic reticulum | 87.58 | 87.01 |
| CDY52280 | Canola | endoplasmic reticulum | 87.58 | 87.01 |
| CDY15105 | Canola | endoplasmic reticulum | 87.58 | 86.45 |
| VIT_00s0260g00060.t01 | Wine grape | endoplasmic reticulum | 77.12 | 79.73 |
| GSMUA_Achr7P22790_001 | Banana | endoplasmic reticulum | 72.55 | 73.03 |
| AT5G48580.1 | Thale cress | endoplasmic reticulum, extracellular | 69.93 | 65.64 |
| AT5G05420.1 | Thale cress | cytosol | 26.8 | 28.67 |
| AT5G45680.1 | Thale cress | plastid | 33.33 | 24.52 |
| AT4G39710.1 | Thale cress | plastid | 30.72 | 21.66 |
| AT2G43560.1 | Thale cress | plastid | 26.8 | 18.39 |
| AT4G25340.1 | Thale cress | nucleus | 32.68 | 10.48 |
| AT3G12340.1 | Thale cress | nucleus | 26.8 | 8.22 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:822115 | ProteinID:AEE76994.1 | ArrayExpress:AT3G25220 | EnsemblPlantsGene:AT3G25220 |
| RefSeq:AT3G25220 | TAIR:AT3G25220 | RefSeq:AT3G25220-TAIR-G | EnsemblPlants:AT3G25220.1 | TAIR:AT3G25220.1 | EMBL:AY062776 |
| EMBL:AY088043 | EMBL:AY128760 | Unigene:At.6372 | ProteinID:BAB02081.1 | Symbol:FKBP15-1 | GO:GO:0000413 |
| GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005788 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | GO:GO:0061077 |
| InterPro:IPR001179 | RefSeq:NP_566762.1 | PFAM:PF00254 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 |
| PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 | UniProt:Q38935 | SUPFAM:SSF54534 | SignalP:SignalP-noTM | EMBL:U52046 |
| UniParc:UPI00000014E7 | SEG:seg | : | : | : | : |
Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
Coordinates
chr3:+:9182616..9184679
Molecular Weight (calculated)
16355.8 Da
IEP (calculated)
8.675
GRAVY (calculated)
-0.242
Length
153 amino acids
Sequence
(BLAST)
(BLAST)
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.