Factsheet for AT4G25340.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92695	Canola	nucleus	67.51	72.2
CDY49705	Canola	nucleus	68.34	71.02
Bra019172.1-P	Field mustard	nucleus	68.13	70.81
Bra013887.1-P	Field mustard	nucleus	68.34	70.72
CDX89421	Canola	nucleus	68.13	70.35
CDX94456	Canola	nucleus	55.35	69.29
AT5G05420.1	Thale cress	cytosol	18.87	62.94
GSMUA_Achr3P07930_001	Banana	nucleus	43.4	33.33
AT3G25220.1	Thale cress	endoplasmic reticulum	10.48	32.68
AT5G48580.1	Thale cress	endoplasmic reticulum, extracellular	10.69	31.29
AT5G45680.1	Thale cress	plastid	13.0	29.81
AT3G12340.1	Thale cress	nucleus	29.56	28.26
AT4G39710.1	Thale cress	plastid	10.48	23.04
AT2G43560.1	Thale cress	plastid	9.85	21.08

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	EntrezGene:828637	ProteinID:AEE85043.1	ArrayExpress:AT4G25340
EnsemblPlantsGene:AT4G25340	RefSeq:AT4G25340	TAIR:AT4G25340	RefSeq:AT4G25340-TAIR-G	EnsemblPlants:AT4G25340.1	TAIR:AT4G25340.1
EMBL:AY057543	EMBL:AY143978	Unigene:At.20903	ProteinID:CAB45512.1	ProteinID:CAB81345.1	InterPro:FK506_BP
Symbol:FKBP53	GO:GO:0000412	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0005730	GO:GO:0005737	GO:GO:0005829	GO:GO:0006334	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016853	GO:GO:0018208	GO:GO:0019538
GO:GO:0042393	InterPro:IPR001179	RefSeq:NP_567717.1	PFAM:PF00254	PIRSF:PIRSF001473	PO:PO:0000013
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0006085	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098
PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019
PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029
PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052
PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	UniProt:Q93ZG9
SUPFAM:SSF54534	UniParc:UPI00000ABF6E	SEG:seg	:	:	:

Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]

Coordinates

chr4:-:12959349..12962771

Molecular Weight (calculated)

52225.4 Da

IEP (calculated)

4.663

GRAVY (calculated)

-1.008

Length

477 amino acids

Sequence
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.