Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 9
- vacuole 6
- plasma membrane 5
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr4P08270_001 | |
| GSMUA_Achr4P15460_001 | |
| GSMUA_Achr6P14800_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G25220.1 | GSMUA_Achr4P08270_001 | AT3G16310.1 | 21798944 |
| AT3G25220.1 | GSMUA_Achr4P15460_001 | AT3G16310.1 | 21798944 |
| AT3G25220.1 | GSMUA_Achr6P14800_001 | AT3G16310.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_00s0260g00060.t01 | Wine grape | endoplasmic reticulum | 81.58 | 83.78 |
| EER99137 | Sorghum | endoplasmic reticulum | 75.66 | 77.18 |
| Os09t0501850-01 | Rice | plasma membrane | 76.97 | 75.97 |
| Os01t0915800-01 | Rice | plasma membrane | 78.95 | 75.95 |
| Zm00001d042372_P002 | Maize | endoplasmic reticulum, extracellular, golgi | 76.97 | 75.48 |
| EES04100 | Sorghum | endoplasmic reticulum | 76.97 | 75.48 |
| TraesCS5D01G286500.1 | Wheat | golgi | 74.34 | 74.34 |
| HORVU5Hr1G075490.3 | Barley | endoplasmic reticulum, extracellular, golgi | 75.0 | 74.03 |
| TraesCS5B01G278800.1 | Wheat | endoplasmic reticulum, golgi | 73.68 | 73.68 |
| Bra013225.1-P | Field mustard | endoplasmic reticulum | 74.34 | 73.38 |
| CDY52280 | Canola | endoplasmic reticulum | 74.34 | 73.38 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 75.66 | 73.25 |
| TraesCS5A01G279500.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 73.03 | 73.03 |
| CDY15105 | Canola | endoplasmic reticulum | 74.34 | 72.9 |
| KRH66149 | Soybean | endoplasmic reticulum | 70.39 | 72.79 |
| CDY67189 | Canola | endoplasmic reticulum | 73.68 | 72.73 |
| AT3G25220.1 | Thale cress | endoplasmic reticulum | 73.03 | 72.55 |
| PGSC0003DMT400022512 | Potato | extracellular | 71.05 | 72.48 |
| TraesCS3D01G417400.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 74.34 | 72.44 |
| TraesCS3B01G457500.1 | Wheat | endoplasmic reticulum, golgi | 74.34 | 71.52 |
| Solyc09g057670.2.1 | Tomato | extracellular | 69.74 | 71.14 |
| Zm00001d021021_P001 | Maize | endoplasmic reticulum | 75.0 | 69.94 |
| KRH07427 | Soybean | endoplasmic reticulum | 69.74 | 68.83 |
| TraesCS3A01G421300.1 | Wheat | extracellular | 60.53 | 58.97 |
| TraesCS3A01G422000.2 | Wheat | endoplasmic reticulum, golgi, vacuole | 73.68 | 55.72 |
| Zm00001d012064_P001 | Maize | endoplasmic reticulum, extracellular, golgi | 67.76 | 55.38 |
| GSMUA_Achr8P06890_001 | Banana | plastid | 32.89 | 22.32 |
| GSMUA_Achr5P24380_001 | Banana | plastid | 32.24 | 20.94 |
| GSMUA_Achr7P23820_001 | Banana | plastid | 30.26 | 19.49 |
| GSMUA_Achr3P07930_001 | Banana | nucleus | 32.24 | 7.89 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | EnsemblPlantsGene:GSMUA_Achr7G22790_001 |
| EnsemblPlants:GSMUA_Achr7P22790_001 | EnsemblPlants:GSMUA_Achr7T22790_001 | InterPro:IPR001179 | UniProt:M0TJW5 | PFAM:PF00254 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF293 | SUPFAM:SSF54534 | SignalP:SignalP-noTM |
| UniParc:UPI0002968E24 | : | : | : | : | : |
Description
FK506-binding protein 2-1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G22790_001]
Coordinates
chr7:-:25196603..25205362
Molecular Weight (calculated)
16132.5 Da
IEP (calculated)
8.218
GRAVY (calculated)
-0.133
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MARLHISVLF AAALILLVSA KKSGDVTELQ IGVKYKPESC TIQAHKGDKI KVHYRGSLTN GEVFDSSFER GDPIEFELGS GQVIKGWDQG LLGMCVGEKR
101: KLKIPAKLGY GAQGSPPKIP GGATLIFDTE LVAVNGKSSS DAGKSTVDES EL
101: KLKIPAKLGY GAQGSPPKIP GGATLIFDTE LVAVNGKSSS DAGKSTVDES EL
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.