CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

extracellular 6
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

nucleus: 21132161
endoplasmic reticulum: 27224218
mitochondrion: 27780359

msms PMID: 21132161 doi

B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick

Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov

msms PMID: 27780359 doi

G Mustafa, S Komatsu

Graduate School of Life and Environmental Science, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

msms PMID: 27224218 doi

X Wang, S Komatsu

Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH07427	Soybean	endoplasmic reticulum	93.88	89.61
PGSC0003DMT400022512	Potato	extracellular	75.51	74.5
VIT_00s0260g00060.t01	Wine grape	endoplasmic reticulum	74.83	74.32
Solyc09g057670.2.1	Tomato	extracellular	73.47	72.48
EER99137	Sorghum	endoplasmic reticulum	72.79	71.81
Os09t0501850-01	Rice	plasma membrane	74.83	71.43
GSMUA_Achr7P22790_001	Banana	endoplasmic reticulum	72.79	70.39
TraesCS5B01G278800.1	Wheat	endoplasmic reticulum, golgi	72.79	70.39
TraesCS5D01G286500.1	Wheat	golgi	72.11	69.74
TraesCS5A01G279500.1	Wheat	endoplasmic reticulum, extracellular, golgi	71.43	69.08
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	72.11	68.83
Zm00001d021021_P001	Maize	endoplasmic reticulum	74.15	66.87
KRH59400	Soybean	extracellular, vacuole	29.93	27.85
KRH43236	Soybean	nucleus	34.69	24.4
KRH42434	Soybean	plastid	33.33	22.69
KRH29576	Soybean	plastid	27.89	17.67
KRH24569	Soybean	plastid	27.89	17.67
KRH77741	Soybean	nucleus	34.69	10.14
KRH27794	Soybean	nucleus	34.69	10.14
KRG89916	Soybean	nucleus	31.29	7.65

Protein Annotations

EntrezGene:100305479	MapMan:18.12.2	Gene3D:3.10.50.40	EMBL:ACUP02001908	EnsemblPlantsGene:GLYMA_03G086100	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	UniProt:I1JM67	InterPro:IPR001179
EnsemblPlants:KRH66149	ProteinID:KRH66149	ProteinID:KRH66149.1	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF293	SUPFAM:SSF54534	SignalP:SignalP-noTM	UniParc:UPI00023C2234

Description

hypothetical protein

Coordinates

chr3:+:25484028..25488184

Molecular Weight (calculated)

15990.4 Da

IEP (calculated)

6.787

GRAVY (calculated)

-0.187

Length

147 amino acids

Sequence
(BLAST)

001: MNALPILLFF LFVSALVYAK KTGDVTELQI GVKHKPASCE VLAHKGDRVK VHYRGKLTDG TVFDSSFERN NPIEFELGTG QVIKGWDQGL LGMCLGEKRK
101: LKIPAKLGYG DQGSPPTIPG GATLIFDTEL VGVNDKSLGE EKENSEL

Best Arabidopsis Sequence Match ( AT5G48580.1 )
(BLAST)

001: MASKMSLRYS LFLIFFSLIS LQGFAKKTGD VSELQIGVKF KPKTCEVQAH KGDTIKVHYR GKLTDGTVFD SSFERGDPFE FKLGSGQVIK GWDQGLLGAC
101: VGEKRKLKIP AKLGYGEQGS PPTIPGGATL IFDTELIAVN EKPAGGEEYG GDEDDEGYGN DEL

Arabidopsis Description

FKBP15-2Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UPA7]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.