Skip to main content
crop-pal logo
Wheat
Search for another protein from :
Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:secretory
iPSORT:secretory
MultiLoc:golgi
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:endoplasmic reticulum
 plastid: 16595579
golgi: 25769308
msms PMID: 25769308 doi
AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré
INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.
msms PMID: 16595579 doi
Y Balmer, WH Vensel, FM DuPont, BB Buchanan, WJ Hurkman
Department of Plant and Microbial Biology, University of California, 111 Koshland Hall, Berkeley, CA 94720, USA.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G278800.1 Wheat endoplasmic reticulum, golgi 98.68 98.68
TraesCS5A01G279500.1 Wheat endoplasmic reticulum, extracellular, golgi 97.37 97.37
HORVU5Hr1G075490.3 Barley endoplasmic reticulum, extracellular, golgi 96.71 95.45
Os09t0501850-01 Rice plasma membrane 88.16 87.01
EER99137 Sorghum endoplasmic reticulum 84.87 86.58
Zm00001d021021_P001 Maize endoplasmic reticulum 84.21 78.53
VIT_00s0260g00060.t01 Wine grape endoplasmic reticulum 75.66 77.7
GSMUA_Achr7P22790_001 Banana endoplasmic reticulum 74.34 74.34
KRH66149 Soybean endoplasmic reticulum 69.74 72.11
TraesCS3D01G417400.1 Wheat endoplasmic reticulum, extracellular, golgi 70.39 68.59
KRH07427 Soybean endoplasmic reticulum 69.08 68.18
Solyc09g057670.2.1 Tomato extracellular 66.45 67.79
PGSC0003DMT400022512 Potato extracellular 65.79 67.11
TraesCS7D01G472600.1 Wheat plastid 34.87 26.11
TraesCS6D01G282000.1 Wheat plastid 28.29 19.37
TraesCS7D01G268300.1 Wheat plastid 28.95 18.72
TraesCS2D01G313000.1 Wheat nucleus 36.18 11.29
TraesCS5D01G164000.1 Wheat nucleus 29.61 10.39
Protein Annotations
EnsemblPlants:TraesCS5D01G286500.1EnsemblPlantsGene:TraesCS5D01G286500Gene3D:3.10.50.40InterPro:IPR001179InterPro:PPIase_FKBPInterPro:PPIase_FKBP_dom
PANTHER:PTHR10516PANTHER:PTHR10516:SF293PFAM:PF00254PFscan:PS50059SEG:segSignalP:SignalP-noTM
SUPFAM:SSF54534MapMan:18.12.2::::
Description
No Description!
Coordinates
chr5D:-:386732941..386735253
Molecular Weight (calculated)
16061.3 Da
IEP (calculated)
5.785
GRAVY (calculated)
-0.105
Length
152 amino acids
Sequence
(BLAST)
001: MAKPRLLLCL LVAAAALLLV ASAKKSGDVS ALQIGVKYKP ESCSISAHKG DRVKVHYRGT LTDGTVFDSS FERGDPIEFE LGTGQVIKGW DQGILGMCIG
101: EKRKLKIPSK LGYGDQGSPP TIPGGATLIF DTELVAVNGE PSSKSEEDDA DL
Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)
001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL
Arabidopsis Description
FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.