Factsheet for TraesCS5D01G164000.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G158900.1	Wheat	nucleus	98.15	98.38
TraesCS5B01G156700.1	Wheat	nucleus	97.0	97.0
HORVU5Hr1G049560.12	Barley	nucleus	88.91	83.33
Os09t0293900-01	Rice	nucleus	64.9	66.27
KXG35300	Sorghum	nucleus	60.97	59.19
Zm00001d019987_P001	Maize	cytosol	58.43	56.98
Zm00001d005534_P001	Maize	nucleus	47.81	55.5
CDY27659	Canola	plastid	33.95	31.48
Bra025447.1-P	Field mustard	plastid	33.72	31.47
VIT_19s0093g00480.t01	Wine grape	nucleus	39.03	30.45
TraesCS2D01G313000.1	Wheat	nucleus	33.72	29.98
TraesCS5D01G286500.1	Wheat	golgi	10.39	29.61
CDX99700	Canola	endoplasmic reticulum, vacuole	33.72	29.38
GSMUA_Achr3P07930_001	Banana	nucleus	41.34	28.82
AT3G12340.1	Thale cress	nucleus	33.03	28.66
Solyc01g091340.2.1	Tomato	nucleus	34.87	27.4
PGSC0003DMT400033263	Potato	nucleus	34.64	27.17
KRG89916	Soybean	nucleus	36.26	26.12
CDY61640	Canola	nucleus	22.17	25.95
TraesCS3D01G417400.1	Wheat	endoplasmic reticulum, extracellular, golgi	8.78	24.36
CDY11786	Canola	cytosol	13.63	22.87
TraesCS7D01G472600.1	Wheat	plastid	9.93	21.18
TraesCS6D01G282000.1	Wheat	plastid	10.62	20.72
TraesCS7D01G268300.1	Wheat	plastid	10.62	19.57
Solyc02g005290.2.1	Tomato	nucleus	21.71	18.15
PGSC0003DMT400037664	Potato	mitochondrion	10.39	16.07

Protein Annotations

EnsemblPlants:TraesCS5D01G164000.1	EnsemblPlantsGene:TraesCS5D01G164000	Gene3D:2.60.120.340	Gene3D:3.10.50.40	InterPro:IPR001179	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PANTHER:PTHR43811	PANTHER:PTHR43811:SF16	PFAM:PF00254	PFscan:PS50059	SEG:seg
SUPFAM:SSF54534	MapMan:18.12.2	:	:	:	:

Description

No Description!

Coordinates

chr5D:-:255575656..255579190

Molecular Weight (calculated)

47802.6 Da

IEP (calculated)

5.348

GRAVY (calculated)

-0.922

Length

433 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPYTHSYNP SHGRLRICQA TLGSCDAATR TVVQCIVGNK KPIILCSLNP KLTEMCHLEI ELEEVDEVLF SVLGQSSVHL SGYYLRPGSR
101: GNAGEEDSES YGEDVGESDT DQDYEGSEDS YESDFIDDGD NEVPEDSDVS DSMDDGDVCS TPDHRKQDSE KHARKVKRQR RLKKKQQVDS SADKIADSPS
201: KPAARRKRGS IFDSASEDED FLAQSEEENL PTPVSLAKKT NGKVSEEIKP GNVTSNDEAK KRSKSDKKRK SDAINEDPAS PMDVTEINGS SVPKQEAEIK
301: KKSKKKKKTL EAEDGKHSNN IRTLEDGLVI EDLSAGNQDA KVASEGNKVY INYVGKLQDG KTVHSNGEEK PYKFKLGSEK VMRGWNLGIT GMRIGEKRRL
401: TIPPSLCNNG GKSVVELPKD STIIYEVELV KVR

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.