Factsheet for HORVU5Hr1G049560.12

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G156700.1	Wheat	nucleus	83.77	89.38
TraesCS5A01G158900.1	Wheat	nucleus	83.55	89.35
TraesCS5D01G164000.1	Wheat	nucleus	83.33	88.91
Os09t0293900-01	Rice	nucleus	59.09	64.39
KXG35300	Sorghum	nucleus	54.98	56.95
Zm00001d019987_P001	Maize	cytosol	51.73	53.83
Zm00001d005534_P001	Maize	nucleus	42.64	52.81
CDY27659	Canola	plastid	29.65	29.34
Bra025447.1-P	Field mustard	plastid	29.44	29.31
HORVU2Hr1G078350.3	Barley	nucleus	30.95	29.01
VIT_19s0093g00480.t01	Wine grape	nucleus	33.98	28.29
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	9.31	27.92
GSMUA_Achr3P07930_001	Banana	nucleus	37.23	27.7
CDX99700	Canola	endoplasmic reticulum, vacuole	29.44	27.36
AT3G12340.1	Thale cress	nucleus	29.22	27.05
HORVU3Hr1G093290.1	Barley	endoplasmic reticulum	8.87	26.11
HORVU6Hr1G023790.2	Barley	cytosol, nucleus	15.37	26.01
Solyc01g091340.2.1	Tomato	nucleus	30.95	25.95
PGSC0003DMT400033263	Potato	nucleus	30.74	25.72
KRG89916	Soybean	nucleus	32.25	24.79
CDY61640	Canola	nucleus	18.61	23.24
CDY11786	Canola	cytosol	12.34	22.09
HORVU7Hr1G109380.4	Barley	plastid	9.09	19.44
HORVU6Hr1G075080.2	Barley	plastid	9.52	18.64
Solyc02g005290.2.1	Tomato	nucleus	17.97	16.02
PGSC0003DMT400037664	Potato	mitochondrion	7.79	12.86
HORVU7Hr1G056240.7	Barley	endoplasmic reticulum, extracellular, mitochondrion	8.87	12.69

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	UniProt:A0A287R5A6	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU5Hr1G049560	EnsemblPlants:HORVU5Hr1G049560.12	InterPro:IPR001179	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF16	SUPFAM:SSF54534
UniParc:UPI000B473741	SEG:seg	:	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287R5A6]

Coordinates

chrchr5H:-:385074572..385077822

Molecular Weight (calculated)

49918.5 Da

IEP (calculated)

6.166

GRAVY (calculated)

-0.748

Length

462 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPYTHSYNP SHGRLRICQA TLGSCDAATR TVVQCIVGNK KPIILCSLNP KLAEMCHLEI ELEEVDEVLF SVLGQSSVHL SGYYLRPGSR
101: GHAGDEDSES YGEDVGESDT DQDYEGSEDS YESDFIDDGD TEVPEHNDVS NSMDDGDICS TPNHLKQDSE KPARKVKKQR LLKKKHRVDS SADKIADSPS
201: KPAVRRKRGS IFDSASEDED FLAQSKEESL PTPVSLAKKT NGKVSEEIKP GNVTSNDEAK KQSNSGRKRK SDEINQDPAS PMDVTEVNGS SVPKQESEIK
301: KKSKKKKKSV EAEDGKHSNN IRTLVDGLVI EDLSAXXXXX XXXXXXETKV YINYVGKLQD GKTVHSNADE KPYKFKLGSE KVMRGWDLGI TGKYLGARCF
401: VYALTQFLDH GLQFMTFTLG MRVGEKRRLT IPPSLCDNGG KSAVEFPKDS TIIYEVELVK VR

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.