CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27659	Canola	plastid	79.46	62.95
CDX99700	Canola	endoplasmic reticulum, vacuole	79.19	58.95
AT3G12340.1	Thale cress	nucleus	62.43	46.29
Zm00001d005534_P001	Maize	nucleus	22.7	22.52
VIT_19s0093g00480.t01	Wine grape	nucleus	33.51	22.34
TraesCS5A01G158900.1	Wheat	nucleus	25.95	22.22
CDX92695	Canola	nucleus	26.76	22.2
TraesCS5D01G164000.1	Wheat	nucleus	25.95	22.17
Os09t0293900-01	Rice	nucleus	25.41	22.17
CDY49705	Canola	nucleus	27.3	22.0
TraesCS5B01G156700.1	Wheat	nucleus	25.41	21.71
KXG35300	Sorghum	nucleus	24.86	20.63
Zm00001d019987_P001	Maize	cytosol	24.59	20.5
KRG89916	Soybean	nucleus	32.43	19.97
CDX94456	Canola	nucleus	20.54	19.95
CDX89421	Canola	nucleus	23.78	19.05
HORVU5Hr1G049560.12	Barley	nucleus	23.24	18.61
CDY13042	Canola	plastid	9.19	16.43
CDY62066	Canola	endoplasmic reticulum	8.11	16.39
CDY52280	Canola	endoplasmic reticulum	6.22	14.94
CDY67189	Canola	endoplasmic reticulum	6.22	14.94
CDY15105	Canola	endoplasmic reticulum	6.22	14.84
CDX85349	Canola	endoplasmic reticulum	6.22	14.38
CDY05669	Canola	endoplasmic reticulum, extracellular, golgi	6.22	14.11
CDX86294	Canola	endoplasmic reticulum	6.22	14.11
Os09t0103800-00	Rice	cytosol	19.73	14.04
CDY42648	Canola	plastid	7.3	13.5
CDY42000	Canola	plastid	7.3	13.5
CDY51059	Canola	endoplasmic reticulum	5.95	13.25
CDY23379	Canola	plastid	7.57	12.96
CDY30419	Canola	plastid	7.3	12.5
PGSC0003DMT400037664	Potato	mitochondrion	9.19	12.14
CDY11786	Canola	cytosol	7.57	10.85
Solyc02g005290.2.1	Tomato	nucleus	14.05	10.04

Protein Annotations

Gene3D:2.60.120.340	Gene3D:3.10.50.40	MapMan:35.1	GO:A0A078J5F9	UniProt:A0A078J5F9	EnsemblPlants:CDY61640
ProteinID:CDY61640	ProteinID:CDY61640.1	ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00034131001	InterPro:IPR001179	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI0004EE20E1	SEG:seg	:

Description

BnaAnng17610DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078J5F9]

Coordinates

chrLK034020:-:85..1933

Molecular Weight (calculated)

41081.8 Da

IEP (calculated)

4.873

GRAVY (calculated)

-0.903

Length

370 amino acids

Sequence
(BLAST)

001: MTSNSGTTSR SILQCNAGNK SPLFLCVLSP EKVDTCQLNI EFQEAEDVIF SVIGPRSVHL TGYFLARNGT GGLSLNDEDS ESFGEDIVDT DVEKGSSDDY
101: DYSDSFINDD DDDDDDQSAR ASDDDELFVK ERVAKTKAKK KSKRLRKKFP VSDSDSDANE DSVEILSNDN DHKIPKVLSS EVPFPSKVTC STLENTSEAM
201: EKKEDKLSGD VDELSPLKKG SEVLPKKKKK RNKESVVINT DEAEEKDMPG TDKAIESSTD VTLSKKKRKK ERREETTGRK KQATEKNIKK EASVKKLPES
301: EISPNKVATE EIEKGKLDGK VAVQGKKVSI LYTGKLKDSG KVFESNLEEG PLRFRLIKNI FDNCQCVINP

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.