Factsheet for Zm00001d019987_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
nucleus 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35300	Sorghum	nucleus	86.94	86.55
Zm00001d005534_P001	Maize	nucleus	68.69	81.77
Os09t0293900-01	Rice	nucleus	58.11	60.85
TraesCS5A01G158900.1	Wheat	nucleus	57.21	58.8
TraesCS5B01G156700.1	Wheat	nucleus	57.21	58.66
TraesCS5D01G164000.1	Wheat	nucleus	56.98	58.43
HORVU5Hr1G049560.12	Barley	nucleus	53.83	51.73
Zm00001d025522_P001	Maize	plasma membrane	36.04	32.32
CDY27659	Canola	plastid	32.43	30.84
Bra025447.1-P	Field mustard	plastid	31.76	30.39
VIT_19s0093g00480.t01	Wine grape	nucleus	37.39	29.91
GSMUA_Achr3P07930_001	Banana	nucleus	41.44	29.63
Zm00001d003535_P001	Maize	nucleus	9.23	29.29
CDX99700	Canola	endoplasmic reticulum, vacuole	32.21	28.77
Solyc01g091340.2.1	Tomato	nucleus	34.68	27.95
AT3G12340.1	Thale cress	nucleus	31.08	27.66
Zm00001d021021_P001	Maize	endoplasmic reticulum	10.14	27.61
PGSC0003DMT400033263	Potato	nucleus	34.23	27.54
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	9.46	27.1
KRG89916	Soybean	nucleus	36.26	26.79
CDY61640	Canola	nucleus	20.5	24.59
CDY11786	Canola	cytosol	14.19	24.42
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	9.23	22.04
Zm00001d018077_P002	Maize	plastid	10.81	21.24
Zm00001d031696_P002	Maize	plastid	10.81	20.51
Zm00001d046940_P001	Maize	plastid	9.46	19.72
Solyc02g005290.2.1	Tomato	nucleus	19.59	16.8
PGSC0003DMT400037664	Potato	mitochondrion	10.14	16.07

Protein Annotations

EntrezGene:100193972	MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	UniProt:A0A1D6I1D7	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	ProteinID:ONM54033.1	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF16	SUPFAM:SSF54534
UniParc:UPI000189D838	EnsemblPlantsGene:Zm00001d019987	EnsemblPlants:Zm00001d019987_P001	EnsemblPlants:Zm00001d019987_T001	SEG:seg	:

Description

Peptidyl-prolyl cis-trans isomerase

Coordinates

chr7:+:82851887..82855838

Molecular Weight (calculated)

49097.3 Da

IEP (calculated)

6.047

GRAVY (calculated)

-0.792

Length

444 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPYTHIHHA DHGRLRICQA TLGNCDAAAR TVLQCNVGNK IPIKLCSLNP KLAETCHLEV EFEEVDDVIF SVIGHSSIHL SGYYVCASNR
101: SNVGDDESES YGEDIGHSST DEEHDTSEDS YESDFIDDRE VPLSEKYGSG SIDDSDDECT QRCHRQKAEK TTQNAERRRR LKKHQVGSTD YDDDDTPVMK
201: HVAKRCAPKI SDSGDDDTPV TKPVVKRRAS IFDSDSDEDD NVPISLALGK KDNAKVAEET EHQNGQANGI TKKRIIDVKK RKQSSISEDP ASSMDMTDAN
301: APSVSKQVDE IKKKSKKKMR NQSGENNEKQ SNIRTLDDGL VVEYLSMGNN DAKVASDGCK VYIKYVGMLK DGKIVESNVS EKPYKFKLGA GKVIRGWDVG
401: IHGMRVGEKR KLTVPPSMLS GGKSVGEVPE NSSVIYEIEL VKVK

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.