Factsheet for Bra025447.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 3
cytosol 2
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99700	Canola	endoplasmic reticulum, vacuole	96.77	90.34
AT3G12340.1	Thale cress	nucleus	68.97	64.13
TraesCS5A01G158900.1	Wheat	nucleus	31.68	34.03
VIT_19s0093g00480.t01	Wine grape	nucleus	40.52	33.87
Os09t0293900-01	Rice	nucleus	30.82	33.73
TraesCS5D01G164000.1	Wheat	nucleus	31.47	33.72
TraesCS5B01G156700.1	Wheat	nucleus	30.82	33.03
Bra019172.1-P	Field mustard	nucleus	32.11	32.46
KXG35300	Sorghum	nucleus	31.03	32.29
Zm00001d019987_P001	Maize	cytosol	30.39	31.76
Zm00001d005534_P001	Maize	nucleus	24.57	30.56
Bra013887.1-P	Field mustard	nucleus	30.17	30.37
HORVU5Hr1G049560.12	Barley	nucleus	29.31	29.44
KRG89916	Soybean	nucleus	37.5	28.95
Bra013225.1-P	Field mustard	endoplasmic reticulum	8.84	26.62
Bra037476.1-P	Field mustard	endoplasmic reticulum	9.27	26.38
Bra017596.1-P	Field mustard	plastid	11.21	25.12
Bra020690.1-P	Field mustard	endoplasmic reticulum	8.84	24.55
Os09t0103800-00	Rice	cytosol	25.43	22.69
Bra011839.1-P	Field mustard	plastid	9.48	22.0
Bra037701.1-P	Field mustard	plastid	9.91	21.3
Solyc02g005290.2.1	Tomato	nucleus	20.47	18.34
PGSC0003DMT400037664	Potato	mitochondrion	9.91	16.43

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	EnsemblPlantsGene:Bra025447	EnsemblPlants:Bra025447.1	EnsemblPlants:Bra025447.1-P
ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179
UniProt:M4E9J1	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811
PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI0002543877	SEG:seg	:	:

Description

AT3G12340 (E=8e-076) | FK506 binding / peptidyl-prolyl cis-trans isomerase

Coordinates

chrA04:+:8688351..8690858

Molecular Weight (calculated)

50955.6 Da

IEP (calculated)

8.399

GRAVY (calculated)

-0.896

Length

464 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPFTLKAAT NDAKRLHLSQ ATLGLSSSGT NRSILQCNVG NKSPLFLCVL SPEKVDSCQL NIEFQEAEDV IFSVIGPRSV HLTGYFLGRS
101: STGGLSLNDD ESESFGEDIV DTDVEKGSSD DYDYSDSFIN DDADHPSSTD DDDLTVKERV AKTKAKKGNK RLRKKFQVSD SDSDETSARA ASEDSVEILN
201: DHKTPKVLSS EAPLPSRVTR SKARSATSEN GEKTSEATTH THKAVDNKKE EKPSGDVEPS PVKNSSELLS KKEKKKKKRN KEPVVINTDE DMPGSQKPET
301: DKAIESSADV TLSKKKRKKE RKEETTGRKK QATEKNMEKE ASSTKKLPES ELSPNEVTVE EIEKGKSDGK VAVQGKKVSI LYTAKLKDTG KVFESNLEGS
401: PLKFRLGGEK VIKGLSNGVE GMRVGDKRRL VIPPSLGYSE EGLKKENVPK NSWLVYEVEA VKVR

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.