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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 9
  • vacuole 6
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX86294 Canola endoplasmic reticulum 100.0 100.0
AT5G48580.1 Thale cress endoplasmic reticulum, extracellular 85.89 85.89
Bra020690.1-P Field mustard endoplasmic reticulum 81.6 79.64
Bra013225.1-P Field mustard endoplasmic reticulum 66.87 70.78
EES04100 Sorghum endoplasmic reticulum 63.19 66.45
Zm00001d042372_P002 Maize endoplasmic reticulum, extracellular, golgi 62.58 65.81
Os01t0915800-01 Rice plasma membrane 62.58 64.56
HORVU3Hr1G093290.1 Barley endoplasmic reticulum 61.35 63.69
TraesCS3D01G417400.1 Wheat endoplasmic reticulum, extracellular, golgi 60.12 62.82
TraesCS3B01G457500.1 Wheat endoplasmic reticulum, golgi 60.74 62.66
TraesCS3A01G421300.1 Wheat extracellular 50.92 53.21
Zm00001d012064_P001 Maize endoplasmic reticulum, extracellular, golgi 55.83 48.92
TraesCS3A01G422000.2 Wheat endoplasmic reticulum, golgi, vacuole 58.9 47.76
Bra017596.1-P Field mustard plastid 31.29 24.64
Bra037701.1-P Field mustard plastid 25.77 19.44
Bra011839.1-P Field mustard plastid 22.7 18.5
Bra019172.1-P Field mustard nucleus 31.9 11.33
Bra013887.1-P Field mustard nucleus 30.06 10.63
Bra025447.1-P Field mustard plastid 26.38 9.27
Protein Annotations
MapMan:18.12.2Gene3D:3.10.50.40EnsemblPlantsGene:Bra037476EnsemblPlants:Bra037476.1EnsemblPlants:Bra037476.1-PGO:GO:0000413
GO:GO:0003674GO:GO:0003755GO:GO:0003824GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016853GO:GO:0019538InterPro:IPR001179UniProt:M4F8R4PFAM:PF00254
InterPro:PPIase_FKBPInterPro:PPIase_FKBP_domPFscan:PS50059PANTHER:PTHR10516PANTHER:PTHR10516:SF293SUPFAM:SSF54534
SignalP:SignalP-noTMUniParc:UPI0001B837AASEG:seg:::
Description
AT5G48580 (E=2e-065) FKBP15-2 | FKBP15-2; FK506 binding / peptidyl-prolyl cis-trans isomerase
Coordinates
chrA06:-:21271954..21273183
Molecular Weight (calculated)
17744.0 Da
IEP (calculated)
4.442
GRAVY (calculated)
-0.320
Length
163 amino acids
Sequence
(BLAST)
001: MCLRYSICLI LFSLISLQAF AKKTGDVSEL QIGVKFKPAT CEVKAHKGDM IKVHYRGKLT DGTVFDSSFE RDEPFEFELG SGQVIKGWDQ GLLGACVGEK
101: RKLKIPAKLG YGEQGSPPTI PGGATLIFDT ELLAVNEKPA GGEEHQEEDD GEDVDDTYGA DEL
Best Arabidopsis Sequence Match ( AT5G48580.1 )
(BLAST)
001: MASKMSLRYS LFLIFFSLIS LQGFAKKTGD VSELQIGVKF KPKTCEVQAH KGDTIKVHYR GKLTDGTVFD SSFERGDPFE FKLGSGQVIK GWDQGLLGAC
101: VGEKRKLKIP AKLGYGEQGS PPTIPGGATL IFDTELIAVN EKPAGGEEYG GDEDDEGYGN DEL
Arabidopsis Description
FKBP15-2Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UPA7]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.