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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 9
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05669 Canola endoplasmic reticulum, extracellular, golgi 92.81 95.09
CDY51059 Canola endoplasmic reticulum 93.41 93.98
AT5G48580.1 Thale cress endoplasmic reticulum, extracellular 83.83 85.89
Bra037476.1-P Field mustard endoplasmic reticulum 79.64 81.6
Bra013225.1-P Field mustard endoplasmic reticulum 64.67 70.13
Os01t0915800-01 Rice plasma membrane 62.87 66.46
Zm00001d042372_P002 Maize endoplasmic reticulum, extracellular, golgi 61.08 65.81
EES04100 Sorghum endoplasmic reticulum 61.08 65.81
HORVU3Hr1G093290.1 Barley endoplasmic reticulum 59.88 63.69
TraesCS3B01G457500.1 Wheat endoplasmic reticulum, golgi 59.88 63.29
TraesCS3D01G417400.1 Wheat endoplasmic reticulum, extracellular, golgi 58.68 62.82
TraesCS3A01G421300.1 Wheat extracellular 51.5 55.13
Zm00001d012064_P001 Maize endoplasmic reticulum, extracellular, golgi 55.09 49.46
TraesCS3A01G422000.2 Wheat endoplasmic reticulum, golgi, vacuole 58.68 48.76
Bra017596.1-P Field mustard plastid 29.94 24.15
Bra037701.1-P Field mustard plastid 25.15 19.44
Bra011839.1-P Field mustard plastid 20.96 17.5
Bra019172.1-P Field mustard nucleus 28.14 10.24
Bra013887.1-P Field mustard nucleus 26.95 9.76
Bra025447.1-P Field mustard plastid 24.55 8.84
Protein Annotations
MapMan:18.12.2Gene3D:3.10.50.40EnsemblPlantsGene:Bra020690EnsemblPlants:Bra020690.1EnsemblPlants:Bra020690.1-PGO:GO:0000413
GO:GO:0003674GO:GO:0003755GO:GO:0003824GO:GO:0006464GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016853GO:GO:0019538InterPro:IPR001179UniProt:M4DVZ6PFAM:PF00254
InterPro:PPIase_FKBPInterPro:PPIase_FKBP_domPFscan:PS50059PANTHER:PTHR10516PANTHER:PTHR10516:SF293SUPFAM:SSF54534
SignalP:SignalP-noTMUniParc:UPI0002546324SEG:seg:::
Description
AT5G48580 (E=1e-064) FKBP15-2 | FKBP15-2; FK506 binding / peptidyl-prolyl cis-trans isomerase
Coordinates
chrA02:-:23738704..23739878
Molecular Weight (calculated)
18204.6 Da
IEP (calculated)
4.675
GRAVY (calculated)
-0.362
Length
167 amino acids
Sequence
(BLAST)
001: MLAKSKMCLP RYSLFLIFFS LISFQGFAKK TGDVSELQIG VKFKPKTCEF KAHKGDRIKV HYRGKLTDGT VFDSSFERGD PFEFELGSGQ VIEGWDQGLL
101: GACVGAKSKL KIPAKLGYGE QGSPPTIPGG ATLIFDTELI AVNGKPTVGK EEDEDEDEDD TSGDDEL
Best Arabidopsis Sequence Match ( AT5G48580.1 )
(BLAST)
001: MASKMSLRYS LFLIFFSLIS LQGFAKKTGD VSELQIGVKF KPKTCEVQAH KGDTIKVHYR GKLTDGTVFD SSFERGDPFE FKLGSGQVIK GWDQGLLGAC
101: VGEKRKLKIP AKLGYGEQGS PPTIPGGATL IFDTELIAVN EKPAGGEEYG GDEDDEGYGN DEL
Arabidopsis Description
FKBP15-2Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178UPA7]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.