Factsheet for Zm00001d042372_P002

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, golgi, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 4
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, golgi
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES04100	Sorghum	endoplasmic reticulum	97.42	97.42
HORVU3Hr1G093290.1	Barley	endoplasmic reticulum	90.32	89.17
TraesCS3D01G417400.1	Wheat	endoplasmic reticulum, extracellular, golgi	89.03	88.46
TraesCS3B01G457500.1	Wheat	endoplasmic reticulum, golgi	89.68	87.97
Os01t0915800-01	Rice	plasma membrane	88.39	86.71
VIT_00s0260g00060.t01	Wine grape	endoplasmic reticulum	73.55	77.03
GSMUA_Achr7P22790_001	Banana	endoplasmic reticulum	75.48	76.97
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	85.81	71.51
TraesCS3A01G421300.1	Wheat	extracellular	69.68	69.23
TraesCS3A01G422000.2	Wheat	endoplasmic reticulum, golgi, vacuole	89.68	69.15
Zm00001d021021_P001	Maize	endoplasmic reticulum	70.97	67.48
CDY05669	Canola	endoplasmic reticulum, extracellular, golgi	67.74	64.42
AT5G48580.1	Thale cress	endoplasmic reticulum, extracellular	67.74	64.42
CDX85349	Canola	endoplasmic reticulum	66.45	64.38
CDY51059	Canola	endoplasmic reticulum	67.74	63.25
CDX86294	Canola	endoplasmic reticulum	65.81	62.58
Bra037476.1-P	Field mustard	endoplasmic reticulum	65.81	62.58
Bra020690.1-P	Field mustard	endoplasmic reticulum	65.81	61.08
Zm00001d046940_P001	Maize	plastid	33.55	24.41
Zm00001d018077_P002	Maize	plastid	27.74	19.03
Zm00001d031696_P002	Maize	plastid	27.1	17.95
Zm00001d003535_P001	Maize	nucleus	14.84	16.43
Zm00001d025522_P001	Maize	plasma membrane	36.77	11.52
Zm00001d019987_P001	Maize	cytosol	27.1	9.46
Zm00001d005534_P001	Maize	nucleus	20.65	8.58

Protein Annotations

EntrezGene:100285758	MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:B4FUK2	EMBL:BT040790	EMBL:EU973775
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	ProteinID:ONM35189.1
ProteinID:ONM35190.1	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516
PANTHER:PTHR10516:SF293	SUPFAM:SSF54534	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI00017B79E2	EnsemblPlantsGene:Zm00001d042372
EnsemblPlants:Zm00001d042372_P002	EnsemblPlants:Zm00001d042372_T002	SEG:seg	:	:	:

Description

Peptidyl-prolyl cis-trans isomerase

Coordinates

chr3:+:163614550..163617331

Molecular Weight (calculated)

16375.9 Da

IEP (calculated)

9.156

GRAVY (calculated)

-0.198

Length

155 amino acids

Sequence
(BLAST)

001: MGKMRQLICL VAAVAAAAIL LTASAKKSGD VTELQIGVKY KPESCTLQAH KGDKIKVHYR GTLTDGSVFD SSYDRGDPFE FTLGNGQVIK GWDQGLLGMC
101: VGEKRKLKIP AKMGYGERGS PPKIPGGATL IFDTELIAVN GKTSGGAKAE SDSEL

Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)

001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL

Arabidopsis Description

FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.