Factsheet for Zm00001d005534_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

mitochondrion 2
nucleus 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35300	Sorghum	nucleus	86.06	71.97
Zm00001d019987_P001	Maize	cytosol	81.77	68.69
Os09t0293900-01	Rice	nucleus	57.64	50.71
TraesCS5A01G158900.1	Wheat	nucleus	55.76	48.15
TraesCS5D01G164000.1	Wheat	nucleus	55.5	47.81
TraesCS5B01G156700.1	Wheat	nucleus	55.5	47.81
HORVU5Hr1G049560.12	Barley	nucleus	52.81	42.64
Zm00001d025522_P001	Maize	plasma membrane	33.51	25.25
CDY27659	Canola	plastid	31.1	24.84
Bra025447.1-P	Field mustard	plastid	30.56	24.57
CDX99700	Canola	endoplasmic reticulum, vacuole	30.83	23.14
GSMUA_Achr3P07930_001	Banana	nucleus	37.8	22.71
CDY61640	Canola	nucleus	22.52	22.7
VIT_19s0093g00480.t01	Wine grape	nucleus	33.24	22.34
Solyc01g091340.2.1	Tomato	nucleus	32.71	22.14
AT3G12340.1	Thale cress	nucleus	29.22	21.84
PGSC0003DMT400033263	Potato	nucleus	32.17	21.74
Zm00001d021021_P001	Maize	endoplasmic reticulum	9.12	20.86
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	8.58	20.65
KRG89916	Soybean	nucleus	32.98	20.47
CDY11786	Canola	cytosol	13.67	19.77
Zm00001d003535_P001	Maize	nucleus	7.24	19.29
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	8.31	16.67
Zm00001d018077_P002	Maize	plastid	9.38	15.49
Zm00001d031696_P002	Maize	plastid	9.38	14.96
Zm00001d046940_P001	Maize	plastid	8.31	14.55
Solyc02g005290.2.1	Tomato	nucleus	17.69	12.74
PGSC0003DMT400037664	Potato	mitochondrion	9.38	12.5

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	UniProt:A0A1D6ENM9	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	ProteinID:ONM21397.1	PFAM:PF00254	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF16	SUPFAM:SSF54534	UniParc:UPI000842F591
EnsemblPlantsGene:Zm00001d005534	EnsemblPlants:Zm00001d005534_P001	EnsemblPlants:Zm00001d005534_T001	SEG:seg	:	:

Description

Peptidyl-prolyl cis-trans isomerase FKBP53

Coordinates

chr2:+:177646510..177655780

Molecular Weight (calculated)

40786.0 Da

IEP (calculated)

4.758

GRAVY (calculated)

-0.612

Length

373 amino acids

Sequence
(BLAST)

001: MATLGNCDAA ARTVLQCNVG NKIPIKLCSL NPKLAETCHL EIEFEEVDDV VFSVIGQSSI HLSGYYVRAS SRSNVGDDES ESYGEDIGHS NTDEEHDASE
101: DSYESDFIDD REVPLPEKYG SDSLDDSDDE FTLGSCHKQK VMKPVVKRNA PKRFDSVDDD PPVKKPVVTC SAPLIVDSGS DENDNVPISV TLGKKDDAKV
201: AEETDPPNQA NDVTEKKIID VKKRKHSVIS EDPALSMDIA DANVPSVPKQ GAEIKKKSKK NMKKQSGEKD EKQSNVRTLQ DGLMVEDLSI GNIDAKVASD
301: SCKVYIKYVG MLKDGKIIES NVSEKPYKFK LGMRVGEKRK LTVPPSMLSG GKSVGEVPAN SSVIYEIELV KVK

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.