Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- vacuole 4
- extracellular 3
- endoplasmic reticulum 4
- plasma membrane 3
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY27659 | Canola | plastid | 91.75 | 97.64 |
| Bra025447.1-P | Field mustard | plastid | 90.34 | 96.77 |
| CDY61640 | Canola | nucleus | 58.95 | 79.19 |
| AT3G12340.1 | Thale cress | nucleus | 65.39 | 65.13 |
| VIT_19s0093g00480.t01 | Wine grape | nucleus | 38.03 | 34.05 |
| TraesCS5A01G158900.1 | Wheat | nucleus | 29.58 | 34.03 |
| Os09t0293900-01 | Rice | nucleus | 28.97 | 33.96 |
| TraesCS5D01G164000.1 | Wheat | nucleus | 29.38 | 33.72 |
| CDX92695 | Canola | nucleus | 30.18 | 33.63 |
| CDY49705 | Canola | nucleus | 30.58 | 33.12 |
| TraesCS5B01G156700.1 | Wheat | nucleus | 28.77 | 33.03 |
| KXG35300 | Sorghum | nucleus | 28.97 | 32.29 |
| Zm00001d019987_P001 | Maize | cytosol | 28.77 | 32.21 |
| Zm00001d005534_P001 | Maize | nucleus | 23.14 | 30.83 |
| CDX89421 | Canola | nucleus | 28.57 | 30.74 |
| HORVU5Hr1G049560.12 | Barley | nucleus | 27.36 | 29.44 |
| KRG89916 | Soybean | nucleus | 35.21 | 29.12 |
| CDX94456 | Canola | nucleus | 21.93 | 28.61 |
| CDX85349 | Canola | endoplasmic reticulum | 8.65 | 26.88 |
| CDY52280 | Canola | endoplasmic reticulum | 8.25 | 26.62 |
| CDY67189 | Canola | endoplasmic reticulum | 8.25 | 26.62 |
| CDY15105 | Canola | endoplasmic reticulum | 8.25 | 26.45 |
| CDX86294 | Canola | endoplasmic reticulum | 8.65 | 26.38 |
| CDY05669 | Canola | endoplasmic reticulum, extracellular, golgi | 8.65 | 26.38 |
| CDY51059 | Canola | endoplasmic reticulum | 8.45 | 25.3 |
| CDY11786 | Canola | cytosol | 13.08 | 25.19 |
| CDY62066 | Canola | endoplasmic reticulum | 9.26 | 25.14 |
| CDY13042 | Canola | plastid | 10.46 | 25.12 |
| Os09t0103800-00 | Rice | cytosol | 23.94 | 22.88 |
| CDY42648 | Canola | plastid | 9.05 | 22.5 |
| CDY42000 | Canola | plastid | 9.05 | 22.5 |
| CDY23379 | Canola | plastid | 9.46 | 21.76 |
| CDY30419 | Canola | plastid | 9.26 | 21.3 |
| Solyc02g005290.2.1 | Tomato | nucleus | 18.71 | 17.95 |
| PGSC0003DMT400037664 | Potato | mitochondrion | 9.26 | 16.43 |
Protein Annotations
| EnsemblPlants:CDX99700 | EnsemblPlantsGene:GSBRNA2T00108268001 | Gene3D:2.60.120.340 | Gene3D:3.10.50.40 | GO:A0A078EC97 | InterPro:IPR001179 |
| InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | ncoils:Coil | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF9 | PFAM:PF00254 |
| PFscan:PS50059 | ProteinID:CDX99700 | ProteinID:CDX99700.1 | SEG:seg | SignalP:SignalP-noTM | SUPFAM:SSF54534 |
| UniParc:UPI0004EF1DB2 | MapMan:18.12.2 | : | : | : | : |
Description
BnaC04g34570D
Coordinates
chrLK031912:-:1237929..1240760
Molecular Weight (calculated)
55010.5 Da
IEP (calculated)
8.182
GRAVY (calculated)
-0.829
Length
497 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFWGWFIVS FLFIYFSKHI YQQITDDSCG VFAGVEVKPG KPFTLKAATN DAKRLHLSQA TLGLSSSGTN RSILQCNVGN KSPLFLCVLS PEKVDSCQLN
101: IEFQEAEDVI FSVIGPRSVH LTGYFLGRSS TAGLSLNDDE SESFGEDIVD TDVEKGSSDD YDYSDSFIND DADHPSSTDD DDLTVKERVA KTKAKKGKKR
201: LRKKFQVSDS DSDETSARAA SEDSVEILNG DNDHKTPKVL SSEVPLPSRV TRSKARCSTL ENGEKTSEAT THTHKDVDNK KEEKPSGDVE PSPVKNGSEV
301: LSKKEKKKKK KRNKEPVVIN TDEDMPGSQK PETDKAIESS ADVTLSKKKR KKERREETRE RKKQATEKNM EKEASSTKKP PESELSPNEV TVEEIEKGKS
401: DGKVAVQGKK VSILYTAKLK DTGKVFESNL EGSPLKFRLG GEKVIKGLSN GVSGMRVGDK RRLIIPPSLG YSEEGLKKEN VPKNSWLVYE VEAVKVR
101: IEFQEAEDVI FSVIGPRSVH LTGYFLGRSS TAGLSLNDDE SESFGEDIVD TDVEKGSSDD YDYSDSFIND DADHPSSTDD DDLTVKERVA KTKAKKGKKR
201: LRKKFQVSDS DSDETSARAA SEDSVEILNG DNDHKTPKVL SSEVPLPSRV TRSKARCSTL ENGEKTSEAT THTHKDVDNK KEEKPSGDVE PSPVKNGSEV
301: LSKKEKKKKK KRNKEPVVIN TDEDMPGSQK PETDKAIESS ADVTLSKKKR KKERREETRE RKKQATEKNM EKEASSTKKP PESELSPNEV TVEEIEKGKS
401: DGKVAVQGKK VSILYTAKLK DTGKVFESNL EGSPLKFRLG GEKVIKGLSN GVSGMRVGDK RRLIIPPSLG YSEEGLKKEN VPKNSWLVYE VEAVKVR
001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
Arabidopsis Description
FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.