Factsheet for TraesCS5B01G156700.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G164000.1	Wheat	nucleus	97.0	97.0
TraesCS5A01G158900.1	Wheat	nucleus	96.54	96.76
HORVU5Hr1G049560.12	Barley	nucleus	89.38	83.77
Os09t0293900-01	Rice	nucleus	65.82	67.22
KXG35300	Sorghum	nucleus	61.2	59.42
Zm00001d019987_P001	Maize	cytosol	58.66	57.21
Zm00001d005534_P001	Maize	nucleus	47.81	55.5
CDY27659	Canola	plastid	33.26	30.84
Bra025447.1-P	Field mustard	plastid	33.03	30.82
VIT_19s0093g00480.t01	Wine grape	nucleus	39.03	30.45
TraesCS2B01G333300.1	Wheat	nucleus	34.18	30.39
GSMUA_Achr3P07930_001	Banana	nucleus	41.8	29.15
CDX99700	Canola	endoplasmic reticulum, vacuole	33.03	28.77
TraesCS5B01G278800.1	Wheat	endoplasmic reticulum, golgi	9.93	28.29
AT3G12340.1	Thale cress	nucleus	32.56	28.26
Solyc01g091340.2.1	Tomato	nucleus	34.87	27.4
PGSC0003DMT400033263	Potato	nucleus	34.64	27.17
TraesCS3B01G457500.1	Wheat	endoplasmic reticulum, golgi	9.47	25.95
KRG89916	Soybean	nucleus	35.8	25.79
CDY61640	Canola	nucleus	21.71	25.41
CDY11786	Canola	cytosol	14.09	23.64
TraesCS7B01G388800.1	Wheat	plastid	9.93	21.18
TraesCS6B01G331700.1	Wheat	plastid	10.62	20.81
Solyc02g005290.2.1	Tomato	nucleus	21.25	17.76
TraesCS7B01G166000.2	Wheat	plastid	9.93	16.23
PGSC0003DMT400037664	Potato	mitochondrion	9.93	15.36

Protein Annotations

EnsemblPlants:TraesCS5B01G156700.1	EnsemblPlantsGene:TraesCS5B01G156700	Gene3D:2.60.120.340	Gene3D:3.10.50.40	InterPro:IPR001179	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PANTHER:PTHR43811	PANTHER:PTHR43811:SF16	PFAM:PF00254	PFscan:PS50059	SEG:seg
SUPFAM:SSF54534	MapMan:18.12.2	:	:	:	:

Description

No Description!

Coordinates

chr5B:-:289160760..289164605

Molecular Weight (calculated)

47753.6 Da

IEP (calculated)

5.085

GRAVY (calculated)

-0.886

Length

433 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPYTHSYNL SHGRLRICQA TLGSCDAATR TVVQCIVGNK KPIILCSLNP KLAEMCHLEI ELEEVDEVLF SVLGQSSVHL SGYYLRPGRR
101: GNAGEEDSES YGEDVGESDT DQDYEGSEDS YESDFIDDGD NEVPEDNDVS DSMDDGDVCS TPDHCKQDSE KHARKVKRQR RLKKKQQVDS SADKIADSPS
201: KPAARCKRGS IFDSASEDED FLAQSEEENL PTPVSLAKKT NGKVSEEIKP GNVTSNDEAK KRSNSDKKRK SDAINEDPAS PMDVTEVNGL SVPKQEAEIK
301: KKSKKKKKTL EAEDGKHSNN IRTLEDGLVI EDLSAGNQDA KVASEGNKVY INYVGKLQDG KTVHSNGEEK PYKFKLGSEK VMRGWNLGIT GMRVGEKRRL
401: TIPPSMCDNG GKSAVELPKD STIIYEVELV KVR

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.