CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY52280	Canola	endoplasmic reticulum	13.95	23.38
CDY67189	Canola	endoplasmic reticulum	13.95	23.38
CDY15105	Canola	endoplasmic reticulum	13.95	23.23
CDY05669	Canola	endoplasmic reticulum, extracellular, golgi	13.95	22.09
CDX85349	Canola	endoplasmic reticulum	13.57	21.88
CDY62066	Canola	endoplasmic reticulum	15.5	21.86
CDY51059	Canola	endoplasmic reticulum	13.95	21.69
CDX86294	Canola	endoplasmic reticulum	13.57	21.47
CDY13042	Canola	plastid	16.67	20.77
CDY23379	Canola	plastid	13.57	16.2
CDY30419	Canola	plastid	13.57	16.2
CDY42000	Canola	plastid	12.4	16.0
CDY42648	Canola	plastid	12.02	15.5
CDX92695	Canola	nucleus	25.97	15.02
CDX94456	Canola	nucleus	22.09	14.96
CDX89421	Canola	nucleus	26.36	14.72
CDY49705	Canola	nucleus	25.97	14.6
Os09t0293900-01	Rice	nucleus	23.64	14.39
Zm00001d019987_P001	Maize	cytosol	24.42	14.19
KXG35300	Sorghum	nucleus	24.42	14.13
TraesCS5B01G156700.1	Wheat	nucleus	23.64	14.09
TraesCS5A01G158900.1	Wheat	nucleus	23.26	13.89
CDY27659	Canola	plastid	24.81	13.7
Zm00001d005534_P001	Maize	nucleus	19.77	13.67
TraesCS5D01G164000.1	Wheat	nucleus	22.87	13.63
CDX99700	Canola	endoplasmic reticulum, vacuole	25.19	13.08
HORVU5Hr1G049560.12	Barley	nucleus	22.09	12.34
Os09t0103800-00	Rice	cytosol	24.81	12.31
CDY61640	Canola	nucleus	10.85	7.57

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	GO:A0A078FET4	UniProt:A0A078FET4	EnsemblPlants:CDY11786	ProteinID:CDY11786
ProteinID:CDY11786.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00050027001
InterPro:IPR001179	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811
PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI0004EE3C73	SEG:seg	:	:

Description

BnaC03g57920DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078FET4]

Coordinates

chrLK032014:+:439290..440778

Molecular Weight (calculated)

28295.5 Da

IEP (calculated)

7.615

GRAVY (calculated)

0.012

Length

258 amino acids

Sequence
(BLAST)

001: METIPRVIFS QPIGYKIEEL RKGNPEGKKA FSGARVSILY TGSLQETGTI FADFTGTPVE LILGSGEILH AVEVGVAGIV GVADMLVGDR RKITVPPRMG
101: YDKRGYGELV PPNACLIFEV ELVDAWDEIP LWEPIDTAPR PKNGFTFEVL VNGLPDSKIA VSGRQVRIRY TGSLLKTGEV FDNKFSIKPR KYLVGSRTMC
201: MGFSFGIHGM HVGEKRTITV PPIYGYGHLG KATVIPPHAW LVYKVELVDA ESVGDVNF

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.