CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX99700	Canola	endoplasmic reticulum, vacuole	97.64	91.75
CDY61640	Canola	nucleus	62.95	79.46
AT3G12340.1	Thale cress	nucleus	69.81	65.33
TraesCS5A01G158900.1	Wheat	nucleus	31.69	34.26
Os09t0293900-01	Rice	nucleus	31.05	34.2
TraesCS5D01G164000.1	Wheat	nucleus	31.48	33.95
VIT_19s0093g00480.t01	Wine grape	nucleus	40.26	33.87
CDX92695	Canola	nucleus	31.91	33.41
TraesCS5B01G156700.1	Wheat	nucleus	30.84	33.26
CDY49705	Canola	nucleus	32.33	32.9
KXG35300	Sorghum	nucleus	31.05	32.51
Zm00001d019987_P001	Maize	cytosol	30.84	32.43
Zm00001d005534_P001	Maize	nucleus	24.84	31.1
CDX89421	Canola	nucleus	30.19	30.52
HORVU5Hr1G049560.12	Barley	nucleus	29.34	29.65
KRG89916	Soybean	nucleus	37.26	28.95
CDX94456	Canola	nucleus	22.91	28.08
CDX85349	Canola	endoplasmic reticulum	9.42	27.5
CDY52280	Canola	endoplasmic reticulum	8.99	27.27
CDY67189	Canola	endoplasmic reticulum	8.99	27.27
CDY15105	Canola	endoplasmic reticulum	8.99	27.1
CDY05669	Canola	endoplasmic reticulum, extracellular, golgi	9.42	26.99
CDX86294	Canola	endoplasmic reticulum	9.42	26.99
CDY51059	Canola	endoplasmic reticulum	9.21	25.9
CDY62066	Canola	endoplasmic reticulum	10.06	25.68
CDY13042	Canola	plastid	11.35	25.6
CDY11786	Canola	cytosol	13.7	24.81
Os09t0103800-00	Rice	cytosol	25.48	22.88
CDY42648	Canola	plastid	9.21	21.5
CDY42000	Canola	plastid	9.21	21.5
CDY23379	Canola	plastid	9.85	21.3
CDY30419	Canola	plastid	9.64	20.83
Solyc02g005290.2.1	Tomato	nucleus	20.13	18.15
PGSC0003DMT400037664	Potato	mitochondrion	9.85	16.43

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	GO:A0A078GR31	UniProt:A0A078GR31	EnsemblPlants:CDY27659
ProteinID:CDY27659	ProteinID:CDY27659.1	ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00038425001	InterPro:IPR001179	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI0004EEFEF0	SEG:seg

Description

BnaUnng00090DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078GR31]

Coordinates

chrLK032208:-:51924..54566

Molecular Weight (calculated)

51433.0 Da

IEP (calculated)

6.714

GRAVY (calculated)

-0.936

Length

467 amino acids

Sequence
(BLAST)

001: MAFWGVEVKP GKPFTLKAAT NDAKRLHLSQ ATLGLSSSGT NRSILQCNVG NKSPLFLCVL SPEKVDSCQL NIEFQEAEDV IFSVIGPRSV HLTGYFLGRS
101: STGGLSLNDD ESESFGEDIV DTDVEKGSSD DYDYSDSFIN DDADHPSSTD DDDLTVKERV AKTKAKKGNK RLRKKFQVSD SDSDETSARA ASEDSVEILN
201: GDNDHKTPKV LSSEVPLPSR VTRSKARSAT SENGEKTSEA TTNTHKDVDN KKEEKPSGDV EPSPVKNGSE VLSKKEKKKK KRNKEPVVIN TDEDMPGSQE
301: PETDKAIESS TDVTLSKKKR KKERREETRE RKKQATEKNM EKEASSTKKL PESELSPNEV TVEEIEKGKS DGKVAVQGKK VSILYTGKLK DTGKVFESNL
401: EGSPLKFRLG GEKVIKGLSN GVEGMRVGDK RRLIIPPSLG YSEEGLKKEN VPKNSWLVYE VEAVKVR

Best Arabidopsis Sequence Match ( AT3G12340.1 )
(BLAST)

001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR

Arabidopsis Description

FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.