Factsheet for Zm00001d025522_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
iPSORT:	plastid
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10880	Sorghum	nucleus	91.72	90.8
Os04t0446500-02	Rice	nucleus	67.07	63.24
TraesCS2B01G333300.1	Wheat	nucleus	61.62	62.63
HORVU2Hr1G078350.3	Barley	nucleus	62.22	62.47
TraesCS2D01G313000.1	Wheat	nucleus	61.41	62.42
TraesCS2A01G314800.2	Wheat	nucleus	58.99	61.86
AT5G05420.1	Thale cress	cytosol	15.15	52.45
Zm00001d003535_P001	Maize	nucleus	12.93	45.71
KRH27794	Soybean	nucleus	39.8	39.16
KRH77741	Soybean	nucleus	39.6	38.97
Solyc03g007170.2.1	Tomato	nucleus	37.37	38.54
PGSC0003DMT400079626	Potato	nucleus	37.17	37.94
VIT_16s0022g01760.t01	Wine grape	nucleus	39.8	37.52
Zm00001d042372_P002	Maize	endoplasmic reticulum, extracellular, golgi	11.52	36.77
Zm00001d019987_P001	Maize	cytosol	32.32	36.04
Zm00001d021021_P001	Maize	endoplasmic reticulum	11.31	34.36
Zm00001d005534_P001	Maize	nucleus	25.25	33.51
GSMUA_Achr3P07930_001	Banana	nucleus	41.62	33.17
Zm00001d012064_P001	Maize	endoplasmic reticulum, extracellular, golgi	10.51	27.96
Zm00001d046940_P001	Maize	plastid	10.51	24.41
Zm00001d018077_P002	Maize	plastid	10.1	22.12
Zm00001d031696_P002	Maize	plastid	10.1	21.37

Protein Annotations

MapMan:18.12.2	Gene3D:2.60.120.340	Gene3D:3.10.50.40	ProteinID:AQK43897.1	ncoils:Coil	InterPro:FK506_BP
GO:GO:0000412	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005528
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016043	GO:GO:0016853	GO:GO:0018208
GO:GO:0019538	InterPro:IPR001179	UniProt:K7UIS1	PFAM:PF00254	PIRSF:PIRSF001473	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR43811	PANTHER:PTHR43811:SF9	SUPFAM:SSF54534	UniParc:UPI000221C059
EnsemblPlantsGene:Zm00001d025522	EnsemblPlants:Zm00001d025522_P001	EnsemblPlants:Zm00001d025522_T001	SEG:seg	:	:

Description

Putative FKBP-type peptidyl-prolyl cis-trans isomerase family protein

Coordinates

chr10:+:121168118..121172140

Molecular Weight (calculated)

53890.4 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.937

Length

495 amino acids

Sequence
(BLAST)

001: MSSFWGVEVK PGKPYTLTHG DFAGRLRLTQ ATLGVEVGKG EKATGVKRCV LQCSAENRDP VFLCVLMPEQ SETCHLELEF EEEVTFSVIG PRSIHLAGYY
101: MTDVCGEDRG DSDSGSDSLQ SSDEDGFLEE DDDGNMVMGY SDSEDDDSES DDEEMAYNQG RGKSSVVIEE IEEDDKAAVA EVQKGLKKQS RENGDESQLQ
201: LAARNPPTES LESEDEDGFP VSFSESKKSS EIVSNKNGGK DKETSNKDLK RKSGAISDRG DSSGGVKAEI DGASKKKKKG KDKSTVMDTG KVNNEEKEVK
301: LHDSPADPVS TKQKKKKNKN KSASEGDTSE QSAKNNNIDK DNEEASAQEA NKKIKKKKAH DISRSESQAG TGLGESDSKE PLQTRTFANG MMIQEVEMGK
401: PDGKKASRGK KVSVRYIGKL KNGTIFDSNV SGRPFEFRLG VGQVISGWDV GVNGMRVGDK RRLTIPPSMG YGSKRVGQIP QNSTLIFDVE LVNVK

Best Arabidopsis Sequence Match ( AT4G25340.1 )
(BLAST)

001: MGFWGLEVKP GKPQAYNPKN EQGKIHVTQA TLGTGLSKEK SVIQCSIGDK APIALCSLLP NKIECCPLNL EFDDDDEPVE FTVTGDRSIH LSGFLEYYQD
101: DEDDYEHDED DSDGIDVGES EEDDSCEYDS EEDEQLDEFE DFLDSNLERY RNAAAPKSGV IIEEIEDEEK PAKDNKAKQT KKKSQASEGE NAKKQIVAIE
201: GAHVPVLESE DEDEDGLPIP KGKSSEVENA SGEKMVVDND EQGSNKKRKA KAAEQDDGQE SANKSKKKKN QKEKKKGENV LNEEAGQVQT GNVLKKQDIS
301: QISSNTKAQD GTANNAMSES SKTPDKSAEK KTKNKKKKKP SDEAAEISGT VEKQTPADSK SSQVRTYPNG LIVEELSMGK PNGKRADPGK TVSVRYIGKL
401: QKNGKIFDSN IGKSPFKFRL GIGSVIKGWD VGVNGMRVGD KRKLTIPPSM GYGVKGAGGQ IPPNSWLTFD VELINVQ

Arabidopsis Description

FKBP53Peptidyl-prolyl cis-trans isomerase FKBP53 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZG9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.