Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G049560.12 | Barley | nucleus | 26.01 | 15.37 |
| HORVU2Hr1G078350.3 | Barley | nucleus | 21.25 | 11.76 |
| HORVU5Hr1G075490.3 | Barley | endoplasmic reticulum, extracellular, golgi | 6.59 | 11.69 |
| HORVU3Hr1G093290.1 | Barley | endoplasmic reticulum | 6.59 | 11.46 |
| HORVU6Hr1G075080.2 | Barley | plastid | 8.06 | 9.32 |
| HORVU7Hr1G109380.4 | Barley | plastid | 6.59 | 8.33 |
| HORVU7Hr1G056240.7 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 6.96 | 5.88 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G023790.2 | EnsemblPlantsGene:HORVU6Hr1G023790 | Gene3D:2.60.120.340 | InterPro:PPIase_FKBP | ncoils:Coil | PANTHER:PTHR43811 |
| PANTHER:PTHR43811:SF16 | SEG:seg | UniParc:UPI000B470952 | UniProt:A0A287TLZ3 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr6H:+:81643812..81645628
Molecular Weight (calculated)
30291.8 Da
IEP (calculated)
4.133
GRAVY (calculated)
-1.024
Length
273 amino acids
Sequence
(BLAST)
(BLAST)
001: NGAPVIICSL NPGFVEMCHL DLEYEENHEV HFSVLGAASV HLSGYYLRGC NCLIRYPEVA PESHGEDVGA EHESDRETSE SHGDGGDVGA EHESDDRETS
101: ESHGDGGDAG EEYDSDWEYH HVSEDVSEDS LESDLLDDGD VEIPDNNHLL SESMDDGHMY STPDRRQEKH QVDSLDVNID SSPYKPAVSQ MFNSGSEDKD
201: SVAQNEEKSM NMHVSLPKNS NVKVSDENVT SNDETKKEIN GARKRKNDAI NQDLASPMES NRGQWIIDPR TRT
101: ESHGDGGDAG EEYDSDWEYH HVSEDVSEDS LESDLLDDGD VEIPDNNHLL SESMDDGHMY STPDRRQEKH QVDSLDVNID SSPYKPAVSQ MFNSGSEDKD
201: SVAQNEEKSM NMHVSLPKNS NVKVSDENVT SNDETKKEIN GARKRKNDAI NQDLASPMES NRGQWIIDPR TRT
001: MAFWGVEVKP GKTFTLKNNE ATGIRRLHLS QATLGHGTAT NRSILQCNVG NKSPLLLCVL TPDKVDSCQL NLEFEETDEV IFSVIGPRSV HLTGYFLGRS
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
101: TGFRPNDDES ESFGEDIVDT DMEKGSSDDY DYSDSFINDD DPAVRGSHVS STDDDEISIK EMTAKTKEKK KNGKGRRLRK KFQVSDSDSD ETSARADESS
201: NEDSVEVLNN GNEPKIAKVH SSESPLPSRV TRSKARKSTL ESGEPAKCEK TFEAKINTHK TLDNREDKPL DDAKLSPVQK DCEILSKKKR NKERSKSSAI
301: IIDSDDGEGK NMPESLQNEN PVSDKGIKSS SDVLLSQNGD ATLSKKKKKR DRREETTDVP ECPEKKKQAI DKNIEKEAGT KKPLETRTLS NGVIIEDIEK
401: GKLDGKSAVK GKKVSILYTG KLKDTGNLFD SNLGEDPLRF RLGGENVIEG LSIGVEGMRV GDKRRLIIPP ALGYSKRGLK EKVPKSAWLV YEVEAVKIR
Arabidopsis Description
FKBP43Peptidyl-prolyl cis-trans isomerase FKBP43 [Source:UniProtKB/Swiss-Prot;Acc:F4J9Q6]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.