Factsheet for TraesCS7D01G268300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G325600.1
TraesCS1B01G338800.1
TraesCS1B01G339000.1
TraesCS1D01G327500.1
TraesCS7A01G562100.1
TraesCS7D01G001000.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G43560.1	TraesCS1A01G325600.1	AT5G42980.1	15352244
AT2G43560.1	TraesCS1B01G338800.1	AT5G42980.1	15352244
AT2G43560.1	TraesCS1B01G339000.1	AT5G42980.1	15352244
AT2G43560.1	TraesCS1D01G327500.1	AT5G42980.1	15352244
AT2G43560.1	TraesCS7A01G562100.1	AT5G42980.1	15352244
AT2G43560.1	TraesCS7D01G001000.1	AT5G42980.1	15352244

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d031696_P002	Maize	plastid	77.02	77.35
EES15264	Sorghum	plastid	78.3	76.03
TraesCS7A01G266500.2	Wheat	plastid	76.17	66.79
TraesCS7B01G166000.2	Wheat	plastid	74.47	66.04
Os08t0541400-01	Rice	plastid	71.49	64.37
Bra037701.1-P	Field mustard	plastid	58.72	63.89
CDY30419	Canola	plastid	58.72	63.89
CDY23379	Canola	plastid	58.3	63.43
AT2G43560.1	Thale cress	plastid	58.3	61.44
KRH24569	Soybean	plastid	60.0	60.78
VIT_05s0094g00100.t01	Wine grape	plastid	59.57	60.61
GSMUA_Achr7P23820_001	Banana	plastid	60.85	60.59
KRH29576	Soybean	plastid	59.15	59.91
Solyc04g015040.2.1	Tomato	plastid	57.87	57.87
PGSC0003DMT400038848	Potato	plastid	57.02	57.02
HORVU7Hr1G056240.7	Barley	endoplasmic reticulum, extracellular, mitochondrion	72.77	52.94
TraesCS5D01G286500.1	Wheat	golgi	18.72	28.95
TraesCS3D01G417400.1	Wheat	endoplasmic reticulum, extracellular, golgi	18.3	27.56
TraesCS7D01G472600.1	Wheat	plastid	22.98	26.6
TraesCS6D01G282000.1	Wheat	plastid	21.7	22.97
TraesCS5D01G164000.1	Wheat	nucleus	19.57	10.62
TraesCS2D01G313000.1	Wheat	nucleus	20.0	9.65

Protein Annotations

EnsemblPlants:TraesCS7D01G268300.1	EnsemblPlantsGene:TraesCS7D01G268300	Gene3D:3.10.50.40	InterPro:IPR001179	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PANTHER:PTHR43811	PANTHER:PTHR43811:SF17	PFAM:PF00254	PFscan:PS50059	SEG:seg	SUPFAM:SSF54534
MapMan:18.12.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:252238954..252240528

Molecular Weight (calculated)

23761.6 Da

IEP (calculated)

6.466

GRAVY (calculated)

0.067

Length

235 amino acids

Sequence
(BLAST)

001: MAAAASSSAS PLLLPSGPRG ASSRAWLPSG GGGRAFIRGG NTRAPCCCRA AAGGSAAQCG GADDDNGGVV TRRGVFGAVV LGAALDAVAG GLPPEEKPKL
101: CDAACEAELE NLPMVTTESG LQYKDIKVGQ GPSPPIGFQV AANCIAMVPN GQIFDSSLEK GQPYIFRVGA GQVIKGLDEG ILSMKVGGLR RLYIPGQLAF
201: PKGLTSAPGR PRVAPSSPVV FDVNLLFVPG LDDDE

Best Arabidopsis Sequence Match ( AT2G43560.1 )
(BLAST)

001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE

Arabidopsis Description

FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.