Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 10
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plastid:
23485991
|
plastid:
21433289
extracellular: 28232208 |
gfp PMID:
23485991
doi
Green Bio Research Center, Korea Research Institute of Bioscience and Biotechnology, Daejeon 305-506, Korea.
msms PMID:
21433289
doi
Department of Biology, Plant Biotechnology, ETH Zurich, Zurich, Switzerland.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031696_P002 | Maize | plastid | 72.8 | 81.2 |
| EES15264 | Sorghum | plastid | 72.8 | 78.51 |
| TraesCS7D01G268300.1 | Wheat | plastid | 64.37 | 71.49 |
| AT2G43560.1 | Thale cress | plastid | 55.56 | 65.02 |
| Bra037701.1-P | Field mustard | plastid | 53.64 | 64.81 |
| CDY23379 | Canola | plastid | 53.64 | 64.81 |
| CDY30419 | Canola | plastid | 53.64 | 64.81 |
| KRH24569 | Soybean | plastid | 57.47 | 64.66 |
| KRH29576 | Soybean | plastid | 57.47 | 64.66 |
| GSMUA_Achr7P23820_001 | Banana | plastid | 57.85 | 63.98 |
| VIT_05s0094g00100.t01 | Wine grape | plastid | 56.32 | 63.64 |
| Solyc04g015040.2.1 | Tomato | plastid | 53.64 | 59.57 |
| PGSC0003DMT400038848 | Potato | plastid | 52.87 | 58.72 |
| TraesCS7B01G166000.2 | Wheat | plastid | 54.79 | 53.96 |
| TraesCS7A01G266500.2 | Wheat | plastid | 55.17 | 53.73 |
| HORVU7Hr1G056240.7 | Barley | endoplasmic reticulum, extracellular, mitochondrion | 55.17 | 44.58 |
| Os09t0501850-01 | Rice | plasma membrane | 17.24 | 29.22 |
| Os06t0663800-01 | Rice | extracellular | 22.22 | 26.61 |
| Os01t0915800-01 | Rice | plasma membrane | 14.94 | 24.68 |
| Os02t0751600-01 | Rice | plastid | 21.07 | 23.91 |
| Os09t0293900-01 | Rice | nucleus | 16.86 | 10.38 |
| Os04t0446500-02 | Rice | nucleus | 19.16 | 9.52 |
| Os09t0103800-00 | Rice | cytosol | 18.01 | 9.04 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | ProteinID:BAD03102.1 | ProteinID:BAF24301.1 | ProteinID:BAT06493.1 | ProteinID:EAZ43512.1 |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0006464 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR001179 | EnsemblPlantsGene:Os08g0541400 | EnsemblPlants:Os08t0541400-01 | PFAM:PF00254 | InterPro:PPIase_FKBP |
| InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF17 | UniProt:Q6ZIT9 | SUPFAM:SSF54534 |
| TMHMM:TMhelix | UniParc:UPI0000225FF7 | SEG:seg | : | : | : |
Description
FK506 binding protein 16-3Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os08t0541400-01);Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os08t0541400-02)
Coordinates
chr8:+:27090851..27093340
Molecular Weight (calculated)
27119.7 Da
IEP (calculated)
8.313
GRAVY (calculated)
-0.029
Length
261 amino acids
Sequence
(BLAST)
(BLAST)
001: MAATASSSST ATASPLLLPS ARRPLPSSKP WLPDGRAFRG SRALSSAARR CFCCCCRCEA AGEAGTAPPP QQRGVDDGGV VCTSATRSRR RSVLGVAVGV
101: SSALALGLAA FDDALAAGLP PEEKPKLCDA ACEKDLENVP MVTTESGLQY KDIKVGEGPS PPIGFQVAAN YVAMVPNGQI FDSSLEKGQP YIFRVGSGQV
201: IKGLDEGILS MKVGGLRRLY IPGPLAFPKG LTSAPGRPRV APSSPVMFDV NLLYIPGLDD E
101: SSALALGLAA FDDALAAGLP PEEKPKLCDA ACEKDLENVP MVTTESGLQY KDIKVGEGPS PPIGFQVAAN YVAMVPNGQI FDSSLEKGQP YIFRVGSGQV
201: IKGLDEGILS MKVGGLRRLY IPGPLAFPKG LTSAPGRPRV APSSPVMFDV NLLYIPGLDD E
001: MAASSPSLLL PLGSASRNGL TTKNPNSSRY IAARVIASET REQSCKISNL SSRREAMLLV LGVSGGLSMS SLAAYAAGLP PEDKPRLCEA ECEKELENVP
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
101: MVTTESGLQY KDIKVGRGPS PPVGFQVAAN YVAMVPSGQI FDSSLEKGLP YLFRVGSGQV IKGLDEGILS MKAGGKRRLY IPGPLAFPKG LVSAPGRPRV
201: APNSPVIFDV SLEFIPGLDS EEE
Arabidopsis Description
FKBP16-3Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VVY6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.