Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 3
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 7
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
25047395
plasma membrane: 27800704 extracellular: 28232208 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
25047395
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046940_P001 | Maize | plastid | 75.69 | 77.46 |
| TraesCS7B01G388800.1 | Wheat | plastid | 69.27 | 74.38 |
| TraesCS7D01G472600.1 | Wheat | plastid | 68.81 | 73.89 |
| TraesCS7A01G485300.1 | Wheat | plastid | 68.35 | 73.4 |
| HORVU7Hr1G109380.4 | Barley | plastid | 66.97 | 67.59 |
| OQU76834 | Sorghum | mitochondrion, plastid | 76.15 | 58.45 |
| GSMUA_Achr8P06890_001 | Banana | plastid | 58.26 | 56.7 |
| CDY62066 | Canola | endoplasmic reticulum | 46.33 | 55.19 |
| AT5G45680.1 | Thale cress | plastid | 49.54 | 51.92 |
| Bra017596.1-P | Field mustard | plastid | 48.62 | 51.21 |
| CDY13042 | Canola | plastid | 48.62 | 51.21 |
| KRH42434 | Soybean | plastid | 50.46 | 50.93 |
| VIT_01s0011g00930.t01 | Wine grape | plastid | 49.08 | 49.54 |
| PGSC0003DMT400067618 | Potato | cytosol, plastid | 48.17 | 46.46 |
| Solyc08g006540.2.1 | Tomato | plastid | 47.25 | 39.16 |
| Os02t0751600-01 | Rice | plastid | 38.99 | 36.96 |
| Os09t0501850-01 | Rice | plasma membrane | 24.77 | 35.06 |
| Os01t0915800-01 | Rice | plasma membrane | 23.39 | 32.28 |
| Os08t0541400-01 | Rice | plastid | 26.61 | 22.22 |
| Os09t0103800-00 | Rice | cytosol | 28.44 | 11.92 |
| Os04t0446500-02 | Rice | nucleus | 27.52 | 11.43 |
| Os09t0293900-01 | Rice | nucleus | 21.56 | 11.08 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:4341766 | EMBL:AK105843 | ProteinID:BAD45876.1 | ProteinID:BAF20208.1 |
| ProteinID:BAS99012.1 | ProteinID:EEE66175.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009579 |
| GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 | GO:GO:0031977 | GO:GO:0061077 | InterPro:IPR001179 |
| EnsemblPlantsGene:Os06g0663800 | EnsemblPlants:Os06t0663800-01 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 |
| PANTHER:PTHR10516 | PANTHER:PTHR10516:SF269 | UniProt:Q653Z1 | SUPFAM:SSF54534 | UniParc:UPI000043A439 | RefSeq:XP_015641862.1 |
| SEG:seg | : | : | : | : | : |
Description
FK506 binding protein 13Similar to FKBP-type peptidyl-prolyl cis-trans isomerase 3, chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (AtFKBP13) (FK506 binding protein 1). (Os06t0663800-01)
Coordinates
chr6:-:27402525..27403746
Molecular Weight (calculated)
21996.5 Da
IEP (calculated)
9.597
GRAVY (calculated)
0.175
Length
218 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPSAAAAAA AAAAAATASP LSRLLLSLPN PSVKLPVSSP SRNAGAAVAA KNSTPVVALR RREAVAAVLS ASILSRVLPA AAEASGGECP LEVAPNGLAF
101: CDRVVGTGAA AEQGQLIKAH YTGRLEDGTV FDSSYKRGKP LTFRVGVGEV IKGWDQGIVG GEGIPPMLAG GKRSLRLPPE LAYGARGAGC RGWEPTSCVI
201: PPNSTLLFDV EYVGRAVG
101: CDRVVGTGAA AEQGQLIKAH YTGRLEDGTV FDSSYKRGKP LTFRVGVGEV IKGWDQGIVG GEGIPPMLAG GKRSLRLPPE LAYGARGAGC RGWEPTSCVI
201: PPNSTLLFDV EYVGRAVG
001: MSSLGFSVGT CSPPSEKRKC RFLVNNSLNK AEAINLRNKQ KVSSDPELSF AQLSSCGRRE AIIGFGFSIG LLDNVSALAE TTSCEFSVSP SGLAFCDKVV
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
Arabidopsis Description
FKBP13Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.