Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS7B01G388800.1 | Wheat | plastid | 97.54 | 97.54 |
TraesCS7D01G472600.1 | Wheat | plastid | 95.57 | 95.57 |
HORVU7Hr1G109380.4 | Barley | plastid | 94.09 | 88.43 |
Zm00001d046940_P001 | Maize | plastid | 71.92 | 68.54 |
Os06t0663800-01 | Rice | extracellular | 73.4 | 68.35 |
OQU76834 | Sorghum | mitochondrion, plastid | 75.86 | 54.23 |
GSMUA_Achr8P06890_001 | Banana | plastid | 57.64 | 52.23 |
CDY62066 | Canola | endoplasmic reticulum | 45.32 | 50.27 |
AT5G45680.1 | Thale cress | plastid | 49.75 | 48.56 |
Bra017596.1-P | Field mustard | plastid | 47.78 | 46.86 |
CDY13042 | Canola | plastid | 47.78 | 46.86 |
KRH42434 | Soybean | plastid | 49.26 | 46.3 |
VIT_01s0011g00930.t01 | Wine grape | plastid | 48.28 | 45.37 |
PGSC0003DMT400067618 | Potato | cytosol, plastid | 49.75 | 44.69 |
Solyc08g006540.2.1 | Tomato | plastid | 49.26 | 38.02 |
TraesCS5A01G279500.1 | Wheat | endoplasmic reticulum, extracellular, golgi | 26.6 | 35.53 |
TraesCS6A01G302500.1 | Wheat | plastid | 37.44 | 34.23 |
TraesCS3A01G421300.1 | Wheat | extracellular | 23.15 | 30.13 |
TraesCS3A01G422000.2 | Wheat | endoplasmic reticulum, golgi, vacuole | 27.59 | 27.86 |
TraesCS7A01G266500.2 | Wheat | plastid | 25.62 | 19.4 |
TraesCS2A01G314800.2 | Wheat | nucleus | 26.6 | 11.44 |
TraesCS5A01G158900.1 | Wheat | nucleus | 20.69 | 9.72 |
Protein Annotations
EnsemblPlants:TraesCS7A01G485300.1 | EnsemblPlantsGene:TraesCS7A01G485300 | Gene3D:3.10.50.40 | InterPro:IPR001179 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
PANTHER:PTHR10516 | PANTHER:PTHR10516:SF269 | PFAM:PF00254 | PFscan:PS50059 | SEG:seg | SUPFAM:SSF54534 |
MapMan:18.12.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr7A:+:676102744..676103590
Molecular Weight (calculated)
20927.4 Da
IEP (calculated)
8.598
GRAVY (calculated)
0.055
Length
203 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPATSTSPL SRLLLSLPKP NAQPPLCAKP PSADSGAGAT SKNLVLRRRE AAAAVLSAAL LTRVLPAAAA ADECALEATP SGLAFCDRVV GTGAEAVKGQ
101: LIKAHYRGML EDGTVFDSSY GRGRPLTIMV GVGEVIKGWD LCLAGGEGIP PMRVGGKRSL RLPPELAYGE KGAGCRGWEP TSCVIPPNST LLFDVEYVGR
201: ASS
101: LIKAHYRGML EDGTVFDSSY GRGRPLTIMV GVGEVIKGWD LCLAGGEGIP PMRVGGKRSL RLPPELAYGE KGAGCRGWEP TSCVIPPNST LLFDVEYVGR
201: ASS
001: MSSLGFSVGT CSPPSEKRKC RFLVNNSLNK AEAINLRNKQ KVSSDPELSF AQLSSCGRRE AIIGFGFSIG LLDNVSALAE TTSCEFSVSP SGLAFCDKVV
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
101: GYGPEAVKGQ LIKAHYVGKL ENGKVFDSSY NRGKPLTFRI GVGEVIKGWD QGILGSDGIP PMLTGGKRTL RIPPELAYGD RGAGCKGGSC LIPPASVLLF
201: DIEYIGKA
Arabidopsis Description
FKBP13Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9SCY2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.