Factsheet for Solyc09g057670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 9
vacuole 5
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	endoplasmic reticulum

extracellular: 22364583
extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

msms PMID: 22364583 doi

P Shah, AL Powell, R Orlando, C Bergmann, G Gutierrez-Sanchez

Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400022512	Potato	extracellular	95.3	95.3
VIT_00s0260g00060.t01	Wine grape	endoplasmic reticulum	73.15	73.65
KRH66149	Soybean	endoplasmic reticulum	72.48	73.47
EER99137	Sorghum	endoplasmic reticulum	71.81	71.81
KRH07427	Soybean	endoplasmic reticulum	73.83	71.43
GSMUA_Achr7P22790_001	Banana	endoplasmic reticulum	71.14	69.74
Os09t0501850-01	Rice	plasma membrane	70.47	68.18
TraesCS5A01G279500.1	Wheat	endoplasmic reticulum, extracellular, golgi	69.13	67.76
HORVU5Hr1G075490.3	Barley	endoplasmic reticulum, extracellular, golgi	69.13	66.88
TraesCS5D01G286500.1	Wheat	golgi	67.79	66.45
TraesCS5B01G278800.1	Wheat	endoplasmic reticulum, golgi	67.79	66.45
Zm00001d021021_P001	Maize	endoplasmic reticulum	71.81	65.64
Solyc04g054520.2.1	Tomato	nucleus	31.54	22.49
Solyc08g006540.2.1	Tomato	plastid	36.91	20.91
Solyc04g015040.2.1	Tomato	plastid	28.86	18.3
Solyc03g007170.2.1	Tomato	nucleus	34.23	10.62
Solyc01g091340.2.1	Tomato	nucleus	30.87	8.35
Solyc02g005290.2.1	Tomato	nucleus	26.17	7.53

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538
GO:GO:0061077	InterPro:IPR001179	UniProt:K4CTF8	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF293	SUPFAM:SSF54534	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc09g057670.2
EnsemblPlants:Solyc09g057670.2.1	UniParc:UPI000276B36E	SEG:seg	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:K4CTF8]

Coordinates

chr9:-:50129156..50133564

Molecular Weight (calculated)

16047.4 Da

IEP (calculated)

8.207

GRAVY (calculated)

-0.168

Length

149 amino acids

Sequence
(BLAST)

001: MEFGRAINPT TLFIVFLLVT LVTAKKSGDV TELQIGVKFK PTSCELKAHK GDRVSVHYSG KLTDGTVFDS SYERNDPIEF ELGSGQVIKG WDQGLLGMCV
101: GEKRKLKIPA KLGYGESGSP PKIPGGATLV FDTELVAVNG KKTTADNEL

Best Arabidopsis Sequence Match ( AT3G25220.1 )
(BLAST)

001: MMSSASAMKA VGFLLLLTIL TLAYAKKSGD VTELQIGVKY KPQKCDLQAH KGDKIKVHYR GKLTDGTVFD SSFERGDPIE FELGTGQVIP GWDQGLLGAC
101: VGEKRKLKIP SKLGYGDNGS PPKIPGGATL IFDTELVAVN GEPSSEAKSK NEL

Arabidopsis Description

FKBP15-1Peptidyl-prolyl cis-trans isomerase FKBP15-1 [Source:UniProtKB/Swiss-Prot;Acc:Q38935]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.